RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
TUBB4B-201ENST00000340384 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
TUBB4B-201ENST00000340384 MDN1Q9NU22 5596 aa5.52□□□□□ -1.53
TUBB4B-201ENST00000340384 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
TUBB4B-201ENST00000340384 MT1EP04732 61 aa5.45□□□□□ -1.54
TUBB4B-201ENST00000340384 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
TUBB4B-201ENST00000340384 LCE1AQ5T7P2 110 aa5.41□□□□□ -1.54
TUBB4B-201ENST00000340384 NEBP20929 6669 aa5.41□□□□□ -1.54
TUBB4B-201ENST00000340384 SPRR2EP22531 72 aa5.36□□□□□ -1.55
TUBB4B-201ENST00000340384 SPRR2BP35325 72 aa5.36□□□□□ -1.55
TUBB4B-201ENST00000340384 SPRR2AP35326 72 aa5.36□□□□□ -1.55
TUBB4B-201ENST00000340384 MT1LQ93083 61 aa5.34□□□□□ -1.56
TUBB4B-201ENST00000340384 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
TUBB4B-201ENST00000340384 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
TUBB4B-201ENST00000340384 MT1GP13640 62 aa5.2□□□□□ -1.58
TUBB4B-201ENST00000340384 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
TUBB4B-201ENST00000340384 SPRR2DP22532 72 aa5.16□□□□□ -1.58
TUBB4B-201ENST00000340384 MT1MQ8N339 61 aa5.15□□□□□ -1.58
TUBB4B-201ENST00000340384 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
TUBB4B-201ENST00000340384 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
TUBB4B-201ENST00000340384 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
TUBB4B-201ENST00000340384 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
TUBB4B-201ENST00000340384 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
TUBB4B-201ENST00000340384 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
TUBB4B-201ENST00000340384 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
TUBB4B-201ENST00000340384 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
TUBB4B-201ENST00000340384 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.62
TUBB4B-201ENST00000340384 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.62
TUBB4B-201ENST00000340384 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
TUBB4B-201ENST00000340384 INE1O15225 51 aa4.82□□□□□ -1.64
TUBB4B-201ENST00000340384 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
TUBB4B-201ENST00000340384 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
TUBB4B-201ENST00000340384 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
TUBB4B-201ENST00000340384 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
TUBB4B-201ENST00000340384 MT1AP04731 61 aa4.56□□□□□ -1.68
TUBB4B-201ENST00000340384 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
TUBB4B-201ENST00000340384 MT4P47944 62 aa4.51□□□□□ -1.69
TUBB4B-201ENST00000340384 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
TUBB4B-201ENST00000340384 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
TUBB4B-201ENST00000340384 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
TUBB4B-201ENST00000340384 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
TUBB4B-201ENST00000340384 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
TUBB4B-201ENST00000340384 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
TUBB4B-201ENST00000340384 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
TUBB4B-201ENST00000340384 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
TUBB4B-201ENST00000340384 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
TUBB4B-201ENST00000340384 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
TUBB4B-201ENST00000340384 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
TUBB4B-201ENST00000340384 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.74
TUBB4B-201ENST00000340384 MT3P25713 68 aa4.14□□□□□ -1.75
TUBB4B-201ENST00000340384 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
TUBB4B-201ENST00000340384 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
TUBB4B-201ENST00000340384 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
TUBB4B-201ENST00000340384 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
TUBB4B-201ENST00000340384 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
TUBB4B-201ENST00000340384 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
TUBB4B-201ENST00000340384 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
TUBB4B-201ENST00000340384 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
TUBB4B-201ENST00000340384 PRM1P04553 51 aa3.64□□□□□ -1.83
TUBB4B-201ENST00000340384 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
TUBB4B-201ENST00000340384 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
TUBB4B-201ENST00000340384 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
TUBB4B-201ENST00000340384 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.87
TUBB4B-201ENST00000340384 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
TUBB4B-201ENST00000340384 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
TUBB4B-201ENST00000340384 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
TUBB4B-201ENST00000340384 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.88
TUBB4B-201ENST00000340384 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
TUBB4B-201ENST00000340384 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
TUBB4B-201ENST00000340384 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
TUBB4B-201ENST00000340384 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
TUBB4B-201ENST00000340384 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
TUBB4B-201ENST00000340384 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
TUBB4B-201ENST00000340384 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
TUBB4B-201ENST00000340384 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
TUBB4B-201ENST00000340384 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
TUBB4B-201ENST00000340384 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms