RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 USH2AO75445 5202 aa2.84□□□□□ -1.96
ZNF28-201ENST00000339844 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
ZNF28-201ENST00000339844 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
ZNF28-201ENST00000339844 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
ZNF28-201ENST00000339844 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
ZNF28-201ENST00000339844 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
ZNF28-201ENST00000339844 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
ZNF28-201ENST00000339844 TNP1P09430 55 aa2.78□□□□□ -1.96
ZNF28-201ENST00000339844 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
ZNF28-201ENST00000339844 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
ZNF28-201ENST00000339844 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
ZNF28-201ENST00000339844 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
ZNF28-201ENST00000339844 SPRR2GQ9BYE4 73 aa2.69□□□□□ -1.98
ZNF28-201ENST00000339844 MT1BP07438 61 aa2.67□□□□□ -1.98
ZNF28-201ENST00000339844 KRTAP19-6Q3LI70 58 aa2.67□□□□□ -1.98
ZNF28-201ENST00000339844 KRTAP19-8Q3LI54 63 aa2.66□□□□□ -1.98
ZNF28-201ENST00000339844 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
ZNF28-201ENST00000339844 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
ZNF28-201ENST00000339844 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
ZNF28-201ENST00000339844 LCE3AQ5TA76 89 aa2.53□□□□□ -2
ZNF28-201ENST00000339844 INE1O15225 51 aa2.52□□□□□ -2.01
ZNF28-201ENST00000339844 MT1XP80297 61 aa2.52□□□□□ -2.01
ZNF28-201ENST00000339844 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
ZNF28-201ENST00000339844 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
ZNF28-201ENST00000339844 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
ZNF28-201ENST00000339844 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
ZNF28-201ENST00000339844 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
ZNF28-201ENST00000339844 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
ZNF28-201ENST00000339844 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
ZNF28-201ENST00000339844 KMT2DO14686 5537 aa2.44□□□□□ -2.02
ZNF28-201ENST00000339844 MUC12Q9UKN1 5478 aa2.41□□□□□ -2.02
ZNF28-201ENST00000339844 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
ZNF28-201ENST00000339844 NEBP20929 6669 aa2.39□□□□□ -2.03
ZNF28-201ENST00000339844 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
ZNF28-201ENST00000339844 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
ZNF28-201ENST00000339844 SPRR2EP22531 72 aa2.29□□□□□ -2.04
ZNF28-201ENST00000339844 SPRR2BP35325 72 aa2.29□□□□□ -2.04
ZNF28-201ENST00000339844 SPRR2AP35326 72 aa2.29□□□□□ -2.04
ZNF28-201ENST00000339844 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
ZNF28-201ENST00000339844 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
ZNF28-201ENST00000339844 KRTAP20-1Q3LI63 56 aa2.24□□□□□ -2.05
ZNF28-201ENST00000339844 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
ZNF28-201ENST00000339844 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
ZNF28-201ENST00000339844 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
ZNF28-201ENST00000339844 MT1EP04732 61 aa2.22□□□□□ -2.05
ZNF28-201ENST00000339844 SPRR2DP22532 72 aa2.21□□□□□ -2.06
ZNF28-201ENST00000339844 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
ZNF28-201ENST00000339844 MT1LQ93083 61 aa2.14□□□□□ -2.07
ZNF28-201ENST00000339844 MT1GP13640 62 aa2.12□□□□□ -2.07
ZNF28-201ENST00000339844 MT1MQ8N339 61 aa2.11□□□□□ -2.07
ZNF28-201ENST00000339844 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
ZNF28-201ENST00000339844 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
ZNF28-201ENST00000339844 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
ZNF28-201ENST00000339844 MT1AP04731 61 aa1.94□□□□□ -2.1
ZNF28-201ENST00000339844 MT4P47944 62 aa1.94□□□□□ -2.1
ZNF28-201ENST00000339844 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
ZNF28-201ENST00000339844 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
ZNF28-201ENST00000339844 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
ZNF28-201ENST00000339844 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
ZNF28-201ENST00000339844 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
ZNF28-201ENST00000339844 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
ZNF28-201ENST00000339844 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
ZNF28-201ENST00000339844 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
ZNF28-201ENST00000339844 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
ZNF28-201ENST00000339844 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
ZNF28-201ENST00000339844 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
ZNF28-201ENST00000339844 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
ZNF28-201ENST00000339844 PRM1P04553 51 aa1.68□□□□□ -2.14
ZNF28-201ENST00000339844 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
ZNF28-201ENST00000339844 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
ZNF28-201ENST00000339844 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
ZNF28-201ENST00000339844 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
ZNF28-201ENST00000339844 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
ZNF28-201ENST00000339844 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
ZNF28-201ENST00000339844 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
ZNF28-201ENST00000339844 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
ZNF28-201ENST00000339844 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 180.7 ms