RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
LITAF-201ENST00000339430 MT1EP04732 61 aa5.69□□□□□ -1.5
LITAF-201ENST00000339430 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
LITAF-201ENST00000339430 MT1LQ93083 61 aa5.66□□□□□ -1.5
LITAF-201ENST00000339430 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
LITAF-201ENST00000339430 INE1O15225 51 aa5.6□□□□□ -1.51
LITAF-201ENST00000339430 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
LITAF-201ENST00000339430 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
LITAF-201ENST00000339430 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
LITAF-201ENST00000339430 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
LITAF-201ENST00000339430 MDN1Q9NU22 5596 aa5.44□□□□□ -1.54
LITAF-201ENST00000339430 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
LITAF-201ENST00000339430 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
LITAF-201ENST00000339430 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
LITAF-201ENST00000339430 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
LITAF-201ENST00000339430 MT1GP13640 62 aa5.42□□□□□ -1.54
LITAF-201ENST00000339430 LCE1AQ5T7P2 110 aa5.41□□□□□ -1.54
LITAF-201ENST00000339430 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
LITAF-201ENST00000339430 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.55
LITAF-201ENST00000339430 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
LITAF-201ENST00000339430 SPRR2EP22531 72 aa5.38□□□□□ -1.55
LITAF-201ENST00000339430 SPRR2BP35325 72 aa5.38□□□□□ -1.55
LITAF-201ENST00000339430 SPRR2AP35326 72 aa5.38□□□□□ -1.55
LITAF-201ENST00000339430 MT1MQ8N339 61 aa5.36□□□□□ -1.55
LITAF-201ENST00000339430 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
LITAF-201ENST00000339430 SPRR2DP22532 72 aa5.18□□□□□ -1.58
LITAF-201ENST00000339430 NEBP20929 6669 aa5.17□□□□□ -1.58
LITAF-201ENST00000339430 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
LITAF-201ENST00000339430 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
LITAF-201ENST00000339430 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
LITAF-201ENST00000339430 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
LITAF-201ENST00000339430 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
LITAF-201ENST00000339430 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
LITAF-201ENST00000339430 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
LITAF-201ENST00000339430 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
LITAF-201ENST00000339430 MT1AP04731 61 aa4.73□□□□□ -1.65
LITAF-201ENST00000339430 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
LITAF-201ENST00000339430 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
LITAF-201ENST00000339430 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
LITAF-201ENST00000339430 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
LITAF-201ENST00000339430 MT4P47944 62 aa4.54□□□□□ -1.68
LITAF-201ENST00000339430 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
LITAF-201ENST00000339430 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
LITAF-201ENST00000339430 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
LITAF-201ENST00000339430 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
LITAF-201ENST00000339430 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
LITAF-201ENST00000339430 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
LITAF-201ENST00000339430 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
LITAF-201ENST00000339430 MT3P25713 68 aa4.28□□□□□ -1.72
LITAF-201ENST00000339430 PRM1P04553 51 aa4.27□□□□□ -1.73
LITAF-201ENST00000339430 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
LITAF-201ENST00000339430 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
LITAF-201ENST00000339430 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
LITAF-201ENST00000339430 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
LITAF-201ENST00000339430 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
LITAF-201ENST00000339430 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
LITAF-201ENST00000339430 LCE1EQ5T753 118 aa3.71□□□□□ -1.81
LITAF-201ENST00000339430 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
LITAF-201ENST00000339430 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
LITAF-201ENST00000339430 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
LITAF-201ENST00000339430 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
LITAF-201ENST00000339430 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
LITAF-201ENST00000339430 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
LITAF-201ENST00000339430 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
LITAF-201ENST00000339430 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
LITAF-201ENST00000339430 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
LITAF-201ENST00000339430 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
LITAF-201ENST00000339430 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
LITAF-201ENST00000339430 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
LITAF-201ENST00000339430 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
LITAF-201ENST00000339430 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
LITAF-201ENST00000339430 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
LITAF-201ENST00000339430 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
LITAF-201ENST00000339430 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
LITAF-201ENST00000339430 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
LITAF-201ENST00000339430 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
LITAF-201ENST00000339430 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 332.5 ms