RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
ATAD3A-201ENST00000339113 MUC12Q9UKN1 5478 aa6□□□□□ -1.45
ATAD3A-201ENST00000339113 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
ATAD3A-201ENST00000339113 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
ATAD3A-201ENST00000339113 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
ATAD3A-201ENST00000339113 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
ATAD3A-201ENST00000339113 KRTAP19-3Q7Z4W3 81 aa5.85□□□□□ -1.47
ATAD3A-201ENST00000339113 MT1GP13640 62 aa5.8□□□□□ -1.48
ATAD3A-201ENST00000339113 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
ATAD3A-201ENST00000339113 MT1MQ8N339 61 aa5.78□□□□□ -1.48
ATAD3A-201ENST00000339113 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
ATAD3A-201ENST00000339113 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
ATAD3A-201ENST00000339113 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
ATAD3A-201ENST00000339113 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
ATAD3A-201ENST00000339113 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
ATAD3A-201ENST00000339113 MDN1Q9NU22 5596 aa5.7□□□□□ -1.5
ATAD3A-201ENST00000339113 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
ATAD3A-201ENST00000339113 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
ATAD3A-201ENST00000339113 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
ATAD3A-201ENST00000339113 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
ATAD3A-201ENST00000339113 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.52
ATAD3A-201ENST00000339113 SPRR2EP22531 72 aa5.53□□□□□ -1.52
ATAD3A-201ENST00000339113 SPRR2BP35325 72 aa5.53□□□□□ -1.52
ATAD3A-201ENST00000339113 SPRR2AP35326 72 aa5.53□□□□□ -1.52
ATAD3A-201ENST00000339113 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
ATAD3A-201ENST00000339113 SPRR2DP22532 72 aa5.31□□□□□ -1.56
ATAD3A-201ENST00000339113 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
ATAD3A-201ENST00000339113 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
ATAD3A-201ENST00000339113 NEBP20929 6669 aa5.14□□□□□ -1.59
ATAD3A-201ENST00000339113 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
ATAD3A-201ENST00000339113 MT1AP04731 61 aa5.11□□□□□ -1.59
ATAD3A-201ENST00000339113 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
ATAD3A-201ENST00000339113 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
ATAD3A-201ENST00000339113 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
ATAD3A-201ENST00000339113 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
ATAD3A-201ENST00000339113 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
ATAD3A-201ENST00000339113 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.64
ATAD3A-201ENST00000339113 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
ATAD3A-201ENST00000339113 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
ATAD3A-201ENST00000339113 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
ATAD3A-201ENST00000339113 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
ATAD3A-201ENST00000339113 MT4P47944 62 aa4.67□□□□□ -1.66
ATAD3A-201ENST00000339113 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
ATAD3A-201ENST00000339113 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
ATAD3A-201ENST00000339113 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
ATAD3A-201ENST00000339113 MT3P25713 68 aa4.61□□□□□ -1.67
ATAD3A-201ENST00000339113 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
ATAD3A-201ENST00000339113 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
ATAD3A-201ENST00000339113 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
ATAD3A-201ENST00000339113 PRM1P04553 51 aa4.48□□□□□ -1.69
ATAD3A-201ENST00000339113 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
ATAD3A-201ENST00000339113 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
ATAD3A-201ENST00000339113 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
ATAD3A-201ENST00000339113 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
ATAD3A-201ENST00000339113 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
ATAD3A-201ENST00000339113 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
ATAD3A-201ENST00000339113 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
ATAD3A-201ENST00000339113 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
ATAD3A-201ENST00000339113 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
ATAD3A-201ENST00000339113 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
ATAD3A-201ENST00000339113 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
ATAD3A-201ENST00000339113 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
ATAD3A-201ENST00000339113 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
ATAD3A-201ENST00000339113 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
ATAD3A-201ENST00000339113 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
ATAD3A-201ENST00000339113 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
ATAD3A-201ENST00000339113 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
ATAD3A-201ENST00000339113 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
ATAD3A-201ENST00000339113 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
ATAD3A-201ENST00000339113 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
ATAD3A-201ENST00000339113 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
ATAD3A-201ENST00000339113 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
ATAD3A-201ENST00000339113 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
ATAD3A-201ENST00000339113 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
ATAD3A-201ENST00000339113 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.95
ATAD3A-201ENST00000339113 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
ATAD3A-201ENST00000339113 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
ATAD3A-201ENST00000339113 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 274.3 ms