RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
RBM39-202ENST00000338163 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
RBM39-202ENST00000338163 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
RBM39-202ENST00000338163 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
RBM39-202ENST00000338163 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
RBM39-202ENST00000338163 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
RBM39-202ENST00000338163 MT1LQ93083 61 aa3.97□□□□□ -1.77
RBM39-202ENST00000338163 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.77
RBM39-202ENST00000338163 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
RBM39-202ENST00000338163 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
RBM39-202ENST00000338163 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
RBM39-202ENST00000338163 MT1EP04732 61 aa3.91□□□□□ -1.78
RBM39-202ENST00000338163 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
RBM39-202ENST00000338163 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
RBM39-202ENST00000338163 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
RBM39-202ENST00000338163 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
RBM39-202ENST00000338163 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
RBM39-202ENST00000338163 MT1GP13640 62 aa3.82□□□□□ -1.8
RBM39-202ENST00000338163 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
RBM39-202ENST00000338163 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
RBM39-202ENST00000338163 SPRR2EP22531 72 aa3.77□□□□□ -1.81
RBM39-202ENST00000338163 SPRR2BP35325 72 aa3.77□□□□□ -1.81
RBM39-202ENST00000338163 SPRR2AP35326 72 aa3.77□□□□□ -1.81
RBM39-202ENST00000338163 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
RBM39-202ENST00000338163 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
RBM39-202ENST00000338163 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
RBM39-202ENST00000338163 NEBP20929 6669 aa3.66□□□□□ -1.82
RBM39-202ENST00000338163 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
RBM39-202ENST00000338163 MT1MQ8N339 61 aa3.65□□□□□ -1.82
RBM39-202ENST00000338163 LCE3BQ5TA77 95 aa3.64□□□□□ -1.83
RBM39-202ENST00000338163 SPRR2DP22532 72 aa3.63□□□□□ -1.83
RBM39-202ENST00000338163 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
RBM39-202ENST00000338163 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
RBM39-202ENST00000338163 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
RBM39-202ENST00000338163 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
RBM39-202ENST00000338163 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
RBM39-202ENST00000338163 PRM1P04553 51 aa3.42□□□□□ -1.86
RBM39-202ENST00000338163 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
RBM39-202ENST00000338163 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
RBM39-202ENST00000338163 MT1AP04731 61 aa3.38□□□□□ -1.87
RBM39-202ENST00000338163 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
RBM39-202ENST00000338163 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
RBM39-202ENST00000338163 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
RBM39-202ENST00000338163 MT4P47944 62 aa3.2□□□□□ -1.9
RBM39-202ENST00000338163 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
RBM39-202ENST00000338163 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
RBM39-202ENST00000338163 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
RBM39-202ENST00000338163 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
RBM39-202ENST00000338163 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
RBM39-202ENST00000338163 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
RBM39-202ENST00000338163 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
RBM39-202ENST00000338163 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
RBM39-202ENST00000338163 MT3P25713 68 aa2.96□□□□□ -1.94
RBM39-202ENST00000338163 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
RBM39-202ENST00000338163 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
RBM39-202ENST00000338163 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
RBM39-202ENST00000338163 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
RBM39-202ENST00000338163 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
RBM39-202ENST00000338163 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
RBM39-202ENST00000338163 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
RBM39-202ENST00000338163 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
RBM39-202ENST00000338163 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
RBM39-202ENST00000338163 KRTAP5-8O75690 187 aa2.55□□□□□ -2
RBM39-202ENST00000338163 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
RBM39-202ENST00000338163 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
RBM39-202ENST00000338163 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
RBM39-202ENST00000338163 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
RBM39-202ENST00000338163 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
RBM39-202ENST00000338163 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
RBM39-202ENST00000338163 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
RBM39-202ENST00000338163 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
RBM39-202ENST00000338163 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
RBM39-202ENST00000338163 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
RBM39-202ENST00000338163 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
RBM39-202ENST00000338163 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
RBM39-202ENST00000338163 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
RBM39-202ENST00000338163 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
RBM39-202ENST00000338163 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 135.9 ms