RNA–Protein interactions for RNA: ENST00000336890.9

LCK-202, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-202ENST00000336890 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
LCK-202ENST00000336890 MT1EP04732 61 aa5.62□□□□□ -1.51
LCK-202ENST00000336890 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
LCK-202ENST00000336890 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
LCK-202ENST00000336890 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
LCK-202ENST00000336890 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
LCK-202ENST00000336890 MT1GP13640 62 aa5.28□□□□□ -1.56
LCK-202ENST00000336890 SYNE2Q8WXH0 6885 aaKnown RBP5.26□□□□□ -1.57
LCK-202ENST00000336890 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
LCK-202ENST00000336890 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
LCK-202ENST00000336890 MT1MQ8N339 61 aa5.24□□□□□ -1.57
LCK-202ENST00000336890 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
LCK-202ENST00000336890 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
LCK-202ENST00000336890 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
LCK-202ENST00000336890 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.58
LCK-202ENST00000336890 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.58
LCK-202ENST00000336890 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
LCK-202ENST00000336890 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
LCK-202ENST00000336890 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
LCK-202ENST00000336890 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
LCK-202ENST00000336890 MDN1Q9NU22 5596 aa4.99□□□□□ -1.61
LCK-202ENST00000336890 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
LCK-202ENST00000336890 MT1AP04731 61 aa4.94□□□□□ -1.62
LCK-202ENST00000336890 SPRR2EP22531 72 aa4.89□□□□□ -1.63
LCK-202ENST00000336890 SPRR2BP35325 72 aa4.89□□□□□ -1.63
LCK-202ENST00000336890 SPRR2AP35326 72 aa4.89□□□□□ -1.63
LCK-202ENST00000336890 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
LCK-202ENST00000336890 NEBP20929 6669 aa4.8□□□□□ -1.64
LCK-202ENST00000336890 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
LCK-202ENST00000336890 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
LCK-202ENST00000336890 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
LCK-202ENST00000336890 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
LCK-202ENST00000336890 SPRR2DP22532 72 aa4.71□□□□□ -1.66
LCK-202ENST00000336890 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
LCK-202ENST00000336890 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
LCK-202ENST00000336890 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
LCK-202ENST00000336890 PRM1P04553 51 aa4.51□□□□□ -1.69
LCK-202ENST00000336890 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
LCK-202ENST00000336890 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
LCK-202ENST00000336890 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
LCK-202ENST00000336890 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
LCK-202ENST00000336890 MT3P25713 68 aa4.32□□□□□ -1.72
LCK-202ENST00000336890 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
LCK-202ENST00000336890 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
LCK-202ENST00000336890 MT4P47944 62 aa4.1□□□□□ -1.75
LCK-202ENST00000336890 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
LCK-202ENST00000336890 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
LCK-202ENST00000336890 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
LCK-202ENST00000336890 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
LCK-202ENST00000336890 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
LCK-202ENST00000336890 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
LCK-202ENST00000336890 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
LCK-202ENST00000336890 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
LCK-202ENST00000336890 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
LCK-202ENST00000336890 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
LCK-202ENST00000336890 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
LCK-202ENST00000336890 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
LCK-202ENST00000336890 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
LCK-202ENST00000336890 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
LCK-202ENST00000336890 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
LCK-202ENST00000336890 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
LCK-202ENST00000336890 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
LCK-202ENST00000336890 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
LCK-202ENST00000336890 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
LCK-202ENST00000336890 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
LCK-202ENST00000336890 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
LCK-202ENST00000336890 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
LCK-202ENST00000336890 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
LCK-202ENST00000336890 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
LCK-202ENST00000336890 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
LCK-202ENST00000336890 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.94
LCK-202ENST00000336890 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
LCK-202ENST00000336890 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
LCK-202ENST00000336890 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
LCK-202ENST00000336890 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
LCK-202ENST00000336890 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
LCK-202ENST00000336890 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 286 ms