RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
CDC42EP4-201ENST00000335793 MT1EP04732 61 aa5.61□□□□□ -1.51
CDC42EP4-201ENST00000335793 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
CDC42EP4-201ENST00000335793 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.52
CDC42EP4-201ENST00000335793 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
CDC42EP4-201ENST00000335793 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
CDC42EP4-201ENST00000335793 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
CDC42EP4-201ENST00000335793 DSTQ03001 7570 aaKnown RBP5.51□□□□□ -1.53
CDC42EP4-201ENST00000335793 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
CDC42EP4-201ENST00000335793 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
CDC42EP4-201ENST00000335793 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
CDC42EP4-201ENST00000335793 MT1GP13640 62 aa5.44□□□□□ -1.54
CDC42EP4-201ENST00000335793 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
CDC42EP4-201ENST00000335793 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
CDC42EP4-201ENST00000335793 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
CDC42EP4-201ENST00000335793 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
CDC42EP4-201ENST00000335793 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
CDC42EP4-201ENST00000335793 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
CDC42EP4-201ENST00000335793 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
CDC42EP4-201ENST00000335793 MT1MQ8N339 61 aa5.26□□□□□ -1.57
CDC42EP4-201ENST00000335793 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
CDC42EP4-201ENST00000335793 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
CDC42EP4-201ENST00000335793 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
CDC42EP4-201ENST00000335793 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
CDC42EP4-201ENST00000335793 SPRR2EP22531 72 aa5.02□□□□□ -1.61
CDC42EP4-201ENST00000335793 SPRR2BP35325 72 aa5.02□□□□□ -1.61
CDC42EP4-201ENST00000335793 SPRR2AP35326 72 aa5.02□□□□□ -1.61
CDC42EP4-201ENST00000335793 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
CDC42EP4-201ENST00000335793 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
CDC42EP4-201ENST00000335793 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
CDC42EP4-201ENST00000335793 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
CDC42EP4-201ENST00000335793 PRM1P04553 51 aa4.93□□□□□ -1.62
CDC42EP4-201ENST00000335793 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
CDC42EP4-201ENST00000335793 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
CDC42EP4-201ENST00000335793 NEBP20929 6669 aa4.89□□□□□ -1.63
CDC42EP4-201ENST00000335793 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
CDC42EP4-201ENST00000335793 SPRR2DP22532 72 aa4.81□□□□□ -1.64
CDC42EP4-201ENST00000335793 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
CDC42EP4-201ENST00000335793 MT1AP04731 61 aa4.7□□□□□ -1.66
CDC42EP4-201ENST00000335793 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
CDC42EP4-201ENST00000335793 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
CDC42EP4-201ENST00000335793 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
CDC42EP4-201ENST00000335793 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
CDC42EP4-201ENST00000335793 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
CDC42EP4-201ENST00000335793 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
CDC42EP4-201ENST00000335793 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
CDC42EP4-201ENST00000335793 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
CDC42EP4-201ENST00000335793 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
CDC42EP4-201ENST00000335793 MT4P47944 62 aa4.39□□□□□ -1.71
CDC42EP4-201ENST00000335793 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
CDC42EP4-201ENST00000335793 MT3P25713 68 aa4.31□□□□□ -1.72
CDC42EP4-201ENST00000335793 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
CDC42EP4-201ENST00000335793 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
CDC42EP4-201ENST00000335793 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
CDC42EP4-201ENST00000335793 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
CDC42EP4-201ENST00000335793 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
CDC42EP4-201ENST00000335793 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
CDC42EP4-201ENST00000335793 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
CDC42EP4-201ENST00000335793 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
CDC42EP4-201ENST00000335793 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
CDC42EP4-201ENST00000335793 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
CDC42EP4-201ENST00000335793 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
CDC42EP4-201ENST00000335793 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.84
CDC42EP4-201ENST00000335793 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.86
CDC42EP4-201ENST00000335793 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
CDC42EP4-201ENST00000335793 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CDC42EP4-201ENST00000335793 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
CDC42EP4-201ENST00000335793 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
CDC42EP4-201ENST00000335793 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
CDC42EP4-201ENST00000335793 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CDC42EP4-201ENST00000335793 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
CDC42EP4-201ENST00000335793 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CDC42EP4-201ENST00000335793 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CDC42EP4-201ENST00000335793 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
CDC42EP4-201ENST00000335793 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
CDC42EP4-201ENST00000335793 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CDC42EP4-201ENST00000335793 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms