RNA–Protein interactions for RNA: ENST00000334828.5

PGAM1-201, Transcript of phosphoglycerate mutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAM1, Length 1,830 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1-201ENST00000334828 KRTAP19-5Q3LI72 72 aa7.08□□□□□ -1.28
PGAM1-201ENST00000334828 SPRR2FQ96RM1 72 aa7.05□□□□□ -1.28
PGAM1-201ENST00000334828 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
PGAM1-201ENST00000334828 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
PGAM1-201ENST00000334828 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
PGAM1-201ENST00000334828 MDN1Q9NU22 5596 aa6.85□□□□□ -1.31
PGAM1-201ENST00000334828 MT1EP04732 61 aa6.85□□□□□ -1.31
PGAM1-201ENST00000334828 LCE3CQ5T5A8 94 aa6.83□□□□□ -1.32
PGAM1-201ENST00000334828 SPRR2EP22531 72 aa6.82□□□□□ -1.32
PGAM1-201ENST00000334828 SPRR2BP35325 72 aa6.82□□□□□ -1.32
PGAM1-201ENST00000334828 SPRR2AP35326 72 aa6.82□□□□□ -1.32
PGAM1-201ENST00000334828 LCE1AQ5T7P2 110 aa6.8□□□□□ -1.32
PGAM1-201ENST00000334828 NEBP20929 6669 aa6.73□□□□□ -1.33
PGAM1-201ENST00000334828 KRTAP4-12Q9BQ66 201 aa6.73□□□□□ -1.33
PGAM1-201ENST00000334828 KRTAP19-3Q7Z4W3 81 aa6.69□□□□□ -1.34
PGAM1-201ENST00000334828 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
PGAM1-201ENST00000334828 MT1LQ93083 61 aa6.66□□□□□ -1.34
PGAM1-201ENST00000334828 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
PGAM1-201ENST00000334828 MT1GP13640 62 aa6.62□□□□□ -1.35
PGAM1-201ENST00000334828 SPRR2DP22532 72 aa6.58□□□□□ -1.36
PGAM1-201ENST00000334828 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
PGAM1-201ENST00000334828 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
PGAM1-201ENST00000334828 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
PGAM1-201ENST00000334828 MT1MQ8N339 61 aa6.48□□□□□ -1.37
PGAM1-201ENST00000334828 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
PGAM1-201ENST00000334828 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
PGAM1-201ENST00000334828 KRTAP20-1Q3LI63 56 aa6.44□□□□□ -1.38
PGAM1-201ENST00000334828 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
PGAM1-201ENST00000334828 KRTAP9-9Q9BYP9 154 aa6.39□□□□□ -1.39
PGAM1-201ENST00000334828 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
PGAM1-201ENST00000334828 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
PGAM1-201ENST00000334828 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
PGAM1-201ENST00000334828 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
PGAM1-201ENST00000334828 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.42
PGAM1-201ENST00000334828 INE1O15225 51 aa6.18□□□□□ -1.42
PGAM1-201ENST00000334828 LCE1DQ5T752 114 aa6.15□□□□□ -1.42
PGAM1-201ENST00000334828 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
PGAM1-201ENST00000334828 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.47
PGAM1-201ENST00000334828 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
PGAM1-201ENST00000334828 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
PGAM1-201ENST00000334828 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
PGAM1-201ENST00000334828 MT4P47944 62 aa5.69□□□□□ -1.5
PGAM1-201ENST00000334828 MT1AP04731 61 aa5.67□□□□□ -1.5
PGAM1-201ENST00000334828 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
PGAM1-201ENST00000334828 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
PGAM1-201ENST00000334828 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
PGAM1-201ENST00000334828 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
PGAM1-201ENST00000334828 KRTAP20-2Q3LI61 65 aa5.49□□□□□ -1.53
PGAM1-201ENST00000334828 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
PGAM1-201ENST00000334828 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
PGAM1-201ENST00000334828 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
PGAM1-201ENST00000334828 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
PGAM1-201ENST00000334828 MT3P25713 68 aa5.18□□□□□ -1.58
PGAM1-201ENST00000334828 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
PGAM1-201ENST00000334828 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
PGAM1-201ENST00000334828 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
PGAM1-201ENST00000334828 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
PGAM1-201ENST00000334828 KRTAP5-7Q6L8G8 165 aa4.76□□□□□ -1.65
PGAM1-201ENST00000334828 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
PGAM1-201ENST00000334828 PRM1P04553 51 aa4.7□□□□□ -1.66
PGAM1-201ENST00000334828 KRTAP5-8O75690 187 aa4.69□□□□□ -1.66
PGAM1-201ENST00000334828 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
PGAM1-201ENST00000334828 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.67
PGAM1-201ENST00000334828 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
PGAM1-201ENST00000334828 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
PGAM1-201ENST00000334828 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
PGAM1-201ENST00000334828 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
PGAM1-201ENST00000334828 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
PGAM1-201ENST00000334828 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
PGAM1-201ENST00000334828 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
PGAM1-201ENST00000334828 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
PGAM1-201ENST00000334828 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
PGAM1-201ENST00000334828 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
PGAM1-201ENST00000334828 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
PGAM1-201ENST00000334828 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
PGAM1-201ENST00000334828 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
PGAM1-201ENST00000334828 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms