RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
PTBP3-202ENST00000334318 LCE2AQ5TA79 106 aaPredicted RBP2.22□□□□□ -2.05
PTBP3-202ENST00000334318 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.06
PTBP3-202ENST00000334318 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
PTBP3-202ENST00000334318 KRTAP19-4Q3LI73 84 aa2.19□□□□□ -2.06
PTBP3-202ENST00000334318 KRTAP4-7Q9BYR0 210 aa2.18□□□□□ -2.06
PTBP3-202ENST00000334318 MUC17Q685J3 4493 aa2.16□□□□□ -2.06
PTBP3-202ENST00000334318 KRTAP19-2Q3LHN2 52 aa2.15□□□□□ -2.07
PTBP3-202ENST00000334318 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
PTBP3-202ENST00000334318 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
PTBP3-202ENST00000334318 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
PTBP3-202ENST00000334318 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
PTBP3-202ENST00000334318 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
PTBP3-202ENST00000334318 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.07
PTBP3-202ENST00000334318 LCE1DQ5T752 114 aa2.07□□□□□ -2.08
PTBP3-202ENST00000334318 LOC100996750A0A140TA64 210 aa2.07□□□□□ -2.08
PTBP3-202ENST00000334318 FLGP20930 4061 aaPredicted RBP2.06□□□□□ -2.08
PTBP3-202ENST00000334318 USH2AO75445 5202 aa2.06□□□□□ -2.08
PTBP3-202ENST00000334318 NEBP20929 6669 aa2.03□□□□□ -2.08
PTBP3-202ENST00000334318 MT1LQ93083 61 aa2.03□□□□□ -2.08
PTBP3-202ENST00000334318 KMT2DO14686 5537 aa2.03□□□□□ -2.09
PTBP3-202ENST00000334318 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
PTBP3-202ENST00000334318 KRTAP2-1Q9BYU5 128 aa2.02□□□□□ -2.09
PTBP3-202ENST00000334318 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
PTBP3-202ENST00000334318 MT1EP04732 61 aa2.01□□□□□ -2.09
PTBP3-202ENST00000334318 LCE5AQ5TCM9 118 aa2□□□□□ -2.09
PTBP3-202ENST00000334318 MT1MQ8N339 61 aa2□□□□□ -2.09
PTBP3-202ENST00000334318 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
PTBP3-202ENST00000334318 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
PTBP3-202ENST00000334318 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
PTBP3-202ENST00000334318 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
PTBP3-202ENST00000334318 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
PTBP3-202ENST00000334318 LCE1AQ5T7P2 110 aa1.91□□□□□ -2.1
PTBP3-202ENST00000334318 MT3P25713 68 aa1.89□□□□□ -2.11
PTBP3-202ENST00000334318 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
PTBP3-202ENST00000334318 LCE1EQ5T753 118 aa1.86□□□□□ -2.11
PTBP3-202ENST00000334318 LCE1FQ5T754 118 aa1.86□□□□□ -2.11
PTBP3-202ENST00000334318 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
PTBP3-202ENST00000334318 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
PTBP3-202ENST00000334318 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
PTBP3-202ENST00000334318 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
PTBP3-202ENST00000334318 PRM1P04553 51 aa1.81□□□□□ -2.12
PTBP3-202ENST00000334318 KRTAP9-6A8MVA2 160 aa1.81□□□□□ -2.12
PTBP3-202ENST00000334318 LCE4AQ5TA78 99 aa1.81□□□□□ -2.12
PTBP3-202ENST00000334318 KRTAP4-6Q9BYQ5 205 aa1.81□□□□□ -2.12
PTBP3-202ENST00000334318 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
PTBP3-202ENST00000334318 MT1AP04731 61 aa1.79□□□□□ -2.12
PTBP3-202ENST00000334318 KRTAP9-9Q9BYP9 154 aa1.76□□□□□ -2.13
PTBP3-202ENST00000334318 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
PTBP3-202ENST00000334318 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
PTBP3-202ENST00000334318 KRTAP9-4Q9BYQ2 154 aa1.66□□□□□ -2.14
PTBP3-202ENST00000334318 KRTAP4-12Q9BQ66 201 aa1.65□□□□□ -2.15
PTBP3-202ENST00000334318 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
PTBP3-202ENST00000334318 KRTAP5-9P26371 169 aa1.62□□□□□ -2.15
PTBP3-202ENST00000334318 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
PTBP3-202ENST00000334318 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
PTBP3-202ENST00000334318 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
PTBP3-202ENST00000334318 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
PTBP3-202ENST00000334318 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
PTBP3-202ENST00000334318 KRTAP4-11Q9BYQ6 195 aa1.47□□□□□ -2.17
PTBP3-202ENST00000334318 KRTAP5-3Q6L8H2 238 aa1.47□□□□□ -2.17
PTBP3-202ENST00000334318 KRTAP5-4Q6L8H1 288 aa1.42□□□□□ -2.18
PTBP3-202ENST00000334318 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
PTBP3-202ENST00000334318 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
PTBP3-202ENST00000334318 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
PTBP3-202ENST00000334318 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
PTBP3-202ENST00000334318 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
PTBP3-202ENST00000334318 KRTAP5-5Q701N2 237 aaPredicted RBP1.33□□□□□ -2.2
PTBP3-202ENST00000334318 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
PTBP3-202ENST00000334318 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
PTBP3-202ENST00000334318 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
PTBP3-202ENST00000334318 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
PTBP3-202ENST00000334318 KRTAP5-11Q6L8G4 156 aa1□□□□□ -2.25
PTBP3-202ENST00000334318 KRTAP5-1Q6L8H4 278 aa0.96□□□□□ -2.26
PTBP3-202ENST00000334318 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
PTBP3-202ENST00000334318 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
PTBP3-202ENST00000334318 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms