RNA–Protein interactions for RNA: ENST00000334270.2

TTF1-201, Transcript of transcription termination factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTF1, Length 3,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTF1-201ENST00000334270 M0R2T5 61 aa3.47□□□□□ -1.85
TTF1-201ENST00000334270 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
TTF1-201ENST00000334270 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
TTF1-201ENST00000334270 TNP1P09430 55 aa3.46□□□□□ -1.86
TTF1-201ENST00000334270 MT1XP80297 61 aa3.43□□□□□ -1.86
TTF1-201ENST00000334270 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
TTF1-201ENST00000334270 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
TTF1-201ENST00000334270 KRTAP19-6Q3LI70 58 aa3.35□□□□□ -1.87
TTF1-201ENST00000334270 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
TTF1-201ENST00000334270 INE1O15225 51 aa3.23□□□□□ -1.89
TTF1-201ENST00000334270 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
TTF1-201ENST00000334270 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
TTF1-201ENST00000334270 SSPOA2VEC9 5147 aa3.19□□□□□ -1.9
TTF1-201ENST00000334270 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
TTF1-201ENST00000334270 USH2AO75445 5202 aa3.16□□□□□ -1.9
TTF1-201ENST00000334270 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
TTF1-201ENST00000334270 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
TTF1-201ENST00000334270 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
TTF1-201ENST00000334270 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
TTF1-201ENST00000334270 MT1EP04732 61 aa3.03□□□□□ -1.92
TTF1-201ENST00000334270 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
TTF1-201ENST00000334270 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.92
TTF1-201ENST00000334270 MT1LQ93083 61 aa2.98□□□□□ -1.93
TTF1-201ENST00000334270 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
TTF1-201ENST00000334270 MT1GP13640 62 aa2.9□□□□□ -1.94
TTF1-201ENST00000334270 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
TTF1-201ENST00000334270 KMT2DO14686 5537 aa2.86□□□□□ -1.95
TTF1-201ENST00000334270 FCGBPQ9Y6R7 5405 aaPredicted RBP2.85□□□□□ -1.95
TTF1-201ENST00000334270 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
TTF1-201ENST00000334270 MT1MQ8N339 61 aa2.83□□□□□ -1.96
TTF1-201ENST00000334270 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
TTF1-201ENST00000334270 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
TTF1-201ENST00000334270 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
TTF1-201ENST00000334270 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
TTF1-201ENST00000334270 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
TTF1-201ENST00000334270 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
TTF1-201ENST00000334270 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
TTF1-201ENST00000334270 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
TTF1-201ENST00000334270 MT1AP04731 61 aa2.6□□□□□ -1.99
TTF1-201ENST00000334270 SPRR2EP22531 72 aa2.59□□□□□ -2
TTF1-201ENST00000334270 SPRR2BP35325 72 aa2.59□□□□□ -2
TTF1-201ENST00000334270 SPRR2AP35326 72 aa2.59□□□□□ -2
TTF1-201ENST00000334270 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
TTF1-201ENST00000334270 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
TTF1-201ENST00000334270 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
TTF1-201ENST00000334270 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
TTF1-201ENST00000334270 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2.01
TTF1-201ENST00000334270 SPRR2DP22532 72 aa2.52□□□□□ -2.01
TTF1-201ENST00000334270 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
TTF1-201ENST00000334270 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
TTF1-201ENST00000334270 NEBP20929 6669 aa2.49□□□□□ -2.01
TTF1-201ENST00000334270 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
TTF1-201ENST00000334270 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
TTF1-201ENST00000334270 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
TTF1-201ENST00000334270 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
TTF1-201ENST00000334270 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
TTF1-201ENST00000334270 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
TTF1-201ENST00000334270 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
TTF1-201ENST00000334270 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
TTF1-201ENST00000334270 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
TTF1-201ENST00000334270 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
TTF1-201ENST00000334270 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
TTF1-201ENST00000334270 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
TTF1-201ENST00000334270 PRM1P04553 51 aa2.19□□□□□ -2.06
TTF1-201ENST00000334270 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
TTF1-201ENST00000334270 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
TTF1-201ENST00000334270 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.06
TTF1-201ENST00000334270 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
TTF1-201ENST00000334270 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
TTF1-201ENST00000334270 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
TTF1-201ENST00000334270 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
TTF1-201ENST00000334270 MT4P47944 62 aa2.02□□□□□ -2.09
TTF1-201ENST00000334270 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
TTF1-201ENST00000334270 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
TTF1-201ENST00000334270 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
TTF1-201ENST00000334270 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
TTF1-201ENST00000334270 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 89.7 ms