RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 INE1O15225 51 aa6.23□□□□□ -1.41
SHOX-201ENST00000334060 KRTAP5-9P26371 169 aa6.23□□□□□ -1.41
SHOX-201ENST00000334060 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
SHOX-201ENST00000334060 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
SHOX-201ENST00000334060 MT1EP04732 61 aa6.09□□□□□ -1.43
SHOX-201ENST00000334060 NEBP20929 6669 aa6.05□□□□□ -1.44
SHOX-201ENST00000334060 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
SHOX-201ENST00000334060 SPRR2EP22531 72 aa6□□□□□ -1.45
SHOX-201ENST00000334060 SPRR2BP35325 72 aa6□□□□□ -1.45
SHOX-201ENST00000334060 SPRR2AP35326 72 aa6□□□□□ -1.45
SHOX-201ENST00000334060 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
SHOX-201ENST00000334060 MT1LQ93083 61 aa5.91□□□□□ -1.46
SHOX-201ENST00000334060 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
SHOX-201ENST00000334060 LCE5AQ5TCM9 118 aa5.84□□□□□ -1.47
SHOX-201ENST00000334060 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
SHOX-201ENST00000334060 DSTQ03001 7570 aaKnown RBP5.83□□□□□ -1.48
SHOX-201ENST00000334060 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
SHOX-201ENST00000334060 SPRR2DP22532 72 aa5.76□□□□□ -1.49
SHOX-201ENST00000334060 MT1MQ8N339 61 aa5.75□□□□□ -1.49
SHOX-201ENST00000334060 MT1GP13640 62 aa5.73□□□□□ -1.49
SHOX-201ENST00000334060 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
SHOX-201ENST00000334060 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
SHOX-201ENST00000334060 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
SHOX-201ENST00000334060 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
SHOX-201ENST00000334060 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
SHOX-201ENST00000334060 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
SHOX-201ENST00000334060 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
SHOX-201ENST00000334060 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
SHOX-201ENST00000334060 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
SHOX-201ENST00000334060 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
SHOX-201ENST00000334060 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
SHOX-201ENST00000334060 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
SHOX-201ENST00000334060 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
SHOX-201ENST00000334060 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
SHOX-201ENST00000334060 MT4P47944 62 aa5.11□□□□□ -1.59
SHOX-201ENST00000334060 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
SHOX-201ENST00000334060 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
SHOX-201ENST00000334060 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
SHOX-201ENST00000334060 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
SHOX-201ENST00000334060 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
SHOX-201ENST00000334060 MT1AP04731 61 aa4.97□□□□□ -1.61
SHOX-201ENST00000334060 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
SHOX-201ENST00000334060 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
SHOX-201ENST00000334060 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
SHOX-201ENST00000334060 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
SHOX-201ENST00000334060 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
SHOX-201ENST00000334060 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
SHOX-201ENST00000334060 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
SHOX-201ENST00000334060 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
SHOX-201ENST00000334060 MT3P25713 68 aa4.47□□□□□ -1.69
SHOX-201ENST00000334060 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
SHOX-201ENST00000334060 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
SHOX-201ENST00000334060 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
SHOX-201ENST00000334060 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
SHOX-201ENST00000334060 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
SHOX-201ENST00000334060 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
SHOX-201ENST00000334060 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
SHOX-201ENST00000334060 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
SHOX-201ENST00000334060 PRM1P04553 51 aa4.05□□□□□ -1.76
SHOX-201ENST00000334060 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
SHOX-201ENST00000334060 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
SHOX-201ENST00000334060 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
SHOX-201ENST00000334060 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
SHOX-201ENST00000334060 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
SHOX-201ENST00000334060 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
SHOX-201ENST00000334060 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
SHOX-201ENST00000334060 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
SHOX-201ENST00000334060 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
SHOX-201ENST00000334060 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
SHOX-201ENST00000334060 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
SHOX-201ENST00000334060 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
SHOX-201ENST00000334060 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SHOX-201ENST00000334060 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
SHOX-201ENST00000334060 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
SHOX-201ENST00000334060 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SHOX-201ENST00000334060 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SHOX-201ENST00000334060 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 101.4 ms