RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
LSAMP-201ENST00000333617 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
LSAMP-201ENST00000333617 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
LSAMP-201ENST00000333617 MT2AP02795 61 aa3.81□□□□□ -1.8
LSAMP-201ENST00000333617 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
LSAMP-201ENST00000333617 KRTAP10-10P60014 251 aa3.8□□□□□ -1.8
LSAMP-201ENST00000333617 MT1FP04733 61 aa3.8□□□□□ -1.8
LSAMP-201ENST00000333617 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
LSAMP-201ENST00000333617 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
LSAMP-201ENST00000333617 TNP1P09430 55 aa3.67□□□□□ -1.82
LSAMP-201ENST00000333617 PP632Q6XCG6 107 aa3.65□□□□□ -1.82
LSAMP-201ENST00000333617 MT1BP07438 61 aa3.63□□□□□ -1.83
LSAMP-201ENST00000333617 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
LSAMP-201ENST00000333617 MT1XP80297 61 aa3.55□□□□□ -1.84
LSAMP-201ENST00000333617 USH2AO75445 5202 aa3.51□□□□□ -1.85
LSAMP-201ENST00000333617 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
LSAMP-201ENST00000333617 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
LSAMP-201ENST00000333617 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
LSAMP-201ENST00000333617 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
LSAMP-201ENST00000333617 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
LSAMP-201ENST00000333617 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
LSAMP-201ENST00000333617 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.87
LSAMP-201ENST00000333617 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
LSAMP-201ENST00000333617 KRTAP12-3P60328 96 aa3.34□□□□□ -1.88
LSAMP-201ENST00000333617 KMT2DO14686 5537 aa3.33□□□□□ -1.88
LSAMP-201ENST00000333617 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
LSAMP-201ENST00000333617 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
LSAMP-201ENST00000333617 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
LSAMP-201ENST00000333617 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
LSAMP-201ENST00000333617 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
LSAMP-201ENST00000333617 FCGBPQ9Y6R7 5405 aaPredicted RBP3.25□□□□□ -1.89
LSAMP-201ENST00000333617 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
LSAMP-201ENST00000333617 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
LSAMP-201ENST00000333617 MT1EP04732 61 aa3.1□□□□□ -1.91
LSAMP-201ENST00000333617 SYNE2Q8WXH0 6885 aaKnown RBP3.08□□□□□ -1.92
LSAMP-201ENST00000333617 INE1O15225 51 aa3.06□□□□□ -1.92
LSAMP-201ENST00000333617 MT1LQ93083 61 aa3.06□□□□□ -1.92
LSAMP-201ENST00000333617 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
LSAMP-201ENST00000333617 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
LSAMP-201ENST00000333617 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
LSAMP-201ENST00000333617 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
LSAMP-201ENST00000333617 MT1GP13640 62 aa2.93□□□□□ -1.94
LSAMP-201ENST00000333617 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
LSAMP-201ENST00000333617 NEBP20929 6669 aa2.92□□□□□ -1.94
LSAMP-201ENST00000333617 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
LSAMP-201ENST00000333617 MT1MQ8N339 61 aa2.91□□□□□ -1.94
LSAMP-201ENST00000333617 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
LSAMP-201ENST00000333617 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
LSAMP-201ENST00000333617 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
LSAMP-201ENST00000333617 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
LSAMP-201ENST00000333617 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
LSAMP-201ENST00000333617 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
LSAMP-201ENST00000333617 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
LSAMP-201ENST00000333617 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
LSAMP-201ENST00000333617 SPRR2EP22531 72 aa2.75□□□□□ -1.97
LSAMP-201ENST00000333617 SPRR2BP35325 72 aa2.75□□□□□ -1.97
LSAMP-201ENST00000333617 SPRR2AP35326 72 aa2.75□□□□□ -1.97
LSAMP-201ENST00000333617 SPRR2DP22532 72 aa2.66□□□□□ -1.98
LSAMP-201ENST00000333617 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
LSAMP-201ENST00000333617 MT1AP04731 61 aa2.59□□□□□ -1.99
LSAMP-201ENST00000333617 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
LSAMP-201ENST00000333617 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
LSAMP-201ENST00000333617 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
LSAMP-201ENST00000333617 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
LSAMP-201ENST00000333617 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
LSAMP-201ENST00000333617 MT4P47944 62 aa2.34□□□□□ -2.03
LSAMP-201ENST00000333617 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
LSAMP-201ENST00000333617 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
LSAMP-201ENST00000333617 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
LSAMP-201ENST00000333617 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
LSAMP-201ENST00000333617 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
LSAMP-201ENST00000333617 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
LSAMP-201ENST00000333617 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
LSAMP-201ENST00000333617 PRM1P04553 51 aa2.11□□□□□ -2.07
LSAMP-201ENST00000333617 MUC5ACP98088 5654 aa2□□□□□ -2.09
LSAMP-201ENST00000333617 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
LSAMP-201ENST00000333617 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
LSAMP-201ENST00000333617 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 49.7 ms