RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 NEBP20929 6669 aa1.4□□□□□ -2.19
KNTC1-201ENST00000333479 KRTAP19-6Q3LI70 58 aa1.39□□□□□ -2.19
KNTC1-201ENST00000333479 LCE3CQ5T5A8 94 aa1.39□□□□□ -2.19
KNTC1-201ENST00000333479 SYNE2Q8WXH0 6885 aaKnown RBP1.39□□□□□ -2.19
KNTC1-201ENST00000333479 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
KNTC1-201ENST00000333479 MT4P47944 62 aa1.38□□□□□ -2.19
KNTC1-201ENST00000333479 LRP1Q07954 4544 aaKnown RBP1.37□□□□□ -2.19
KNTC1-201ENST00000333479 LCE1AQ5T7P2 110 aa1.36□□□□□ -2.19
KNTC1-201ENST00000333479 LCE4AQ5TA78 99 aa1.36□□□□□ -2.19
KNTC1-201ENST00000333479 KRTAP19-3Q7Z4W3 81 aa1.35□□□□□ -2.19
KNTC1-201ENST00000333479 KRTAP9-8Q9BYQ0 159 aa1.34□□□□□ -2.2
KNTC1-201ENST00000333479 KRTAP9-3Q9BYQ3 159 aa1.33□□□□□ -2.2
KNTC1-201ENST00000333479 SYNE1Q8NF91 8797 aaKnown RBP1.33□□□□□ -2.2
KNTC1-201ENST00000333479 KRTAP19-2Q3LHN2 52 aa1.32□□□□□ -2.2
KNTC1-201ENST00000333479 KRTAP9-9Q9BYP9 154 aa1.31□□□□□ -2.2
KNTC1-201ENST00000333479 KRTAP9-4Q9BYQ2 154 aa1.31□□□□□ -2.2
KNTC1-201ENST00000333479 MT1BP07438 61 aa1.3□□□□□ -2.2
KNTC1-201ENST00000333479 MT1XP80297 61 aa1.29□□□□□ -2.2
KNTC1-201ENST00000333479 MT1LQ93083 61 aa1.27□□□□□ -2.21
KNTC1-201ENST00000333479 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
KNTC1-201ENST00000333479 LCE3EQ5T5B0 92 aa1.26□□□□□ -2.21
KNTC1-201ENST00000333479 HMCN1Q96RW7 5635 aa1.25□□□□□ -2.21
KNTC1-201ENST00000333479 MT1MQ8N339 61 aa1.24□□□□□ -2.21
KNTC1-201ENST00000333479 LPAP08519 4548 aa1.24□□□□□ -2.21
KNTC1-201ENST00000333479 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
KNTC1-201ENST00000333479 KRTAP4-9Q9BYQ8 210 aa1.24□□□□□ -2.21
KNTC1-201ENST00000333479 FLGP20930 4061 aaPredicted RBP1.24□□□□□ -2.21
KNTC1-201ENST00000333479 MT1EP04732 61 aa1.23□□□□□ -2.21
KNTC1-201ENST00000333479 LCE5AQ5TCM9 118 aa1.22□□□□□ -2.21
KNTC1-201ENST00000333479 KMT2DO14686 5537 aa1.21□□□□□ -2.22
KNTC1-201ENST00000333479 MT1AP04731 61 aa1.21□□□□□ -2.22
KNTC1-201ENST00000333479 LCE1BQ5T7P3 118 aa1.21□□□□□ -2.22
KNTC1-201ENST00000333479 LCE1DQ5T752 114 aa1.21□□□□□ -2.22
KNTC1-201ENST00000333479 FSIP2Q5CZC0 6907 aa1.21□□□□□ -2.22
KNTC1-201ENST00000333479 OBSCNQ5VST9 7968 aa1.2□□□□□ -2.22
KNTC1-201ENST00000333479 KRTAP4-7Q9BYR0 210 aa1.16□□□□□ -2.22
KNTC1-201ENST00000333479 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.22
KNTC1-201ENST00000333479 KRTAP4-8A0A0G2JLE6 195 aa1.15□□□□□ -2.23
KNTC1-201ENST00000333479 KRTAP4-8Q9BYQ9 185 aa1.15□□□□□ -2.23
KNTC1-201ENST00000333479 MACF1Q9UPN3 7388 aaKnown RBP1.15□□□□□ -2.23
KNTC1-201ENST00000333479 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
KNTC1-201ENST00000333479 LCE1CQ5T751 118 aa1.15□□□□□ -2.23
KNTC1-201ENST00000333479 LCE1EQ5T753 118 aa1.15□□□□□ -2.23
KNTC1-201ENST00000333479 LCE1FQ5T754 118 aa1.15□□□□□ -2.23
KNTC1-201ENST00000333479 MDN1Q9NU22 5596 aa1.13□□□□□ -2.23
KNTC1-201ENST00000333479 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
KNTC1-201ENST00000333479 LOC100996750A0A140TA64 210 aa1.1□□□□□ -2.23
KNTC1-201ENST00000333479 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
KNTC1-201ENST00000333479 KRTAP19-7Q3SYF9 63 aa1.08□□□□□ -2.24
KNTC1-201ENST00000333479 KRTAP5-9P26371 169 aa1.07□□□□□ -2.24
KNTC1-201ENST00000333479 KRTAP4-6Q9BYQ5 205 aa1.07□□□□□ -2.24
KNTC1-201ENST00000333479 KRTAP5-3Q6L8H2 238 aa1.03□□□□□ -2.24
KNTC1-201ENST00000333479 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
KNTC1-201ENST00000333479 KRTAP4-3Q9BYR4 195 aa1□□□□□ -2.25
KNTC1-201ENST00000333479 KRTAP5-4Q6L8H1 288 aa0.99□□□□□ -2.25
KNTC1-201ENST00000333479 KRTAP9-6A8MVA2 160 aa0.97□□□□□ -2.25
KNTC1-201ENST00000333479 DSTQ03001 7570 aaKnown RBP0.97□□□□□ -2.25
KNTC1-201ENST00000333479 PRM1P04553 51 aa0.97□□□□□ -2.25
KNTC1-201ENST00000333479 KRTAP4-2Q9BYR5 136 aa0.96□□□□□ -2.26
KNTC1-201ENST00000333479 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
KNTC1-201ENST00000333479 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
KNTC1-201ENST00000333479 KRTAP4-11Q9BYQ6 195 aa0.93□□□□□ -2.26
KNTC1-201ENST00000333479 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
KNTC1-201ENST00000333479 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
KNTC1-201ENST00000333479 KRTAP5-7Q6L8G8 165 aa0.86□□□□□ -2.27
KNTC1-201ENST00000333479 KRTAP4-12Q9BQ66 201 aa0.86□□□□□ -2.27
KNTC1-201ENST00000333479 KRTAP5-5Q701N2 237 aaPredicted RBP0.85□□□□□ -2.27
KNTC1-201ENST00000333479 KRTAP5-8O75690 187 aa0.81□□□□□ -2.28
KNTC1-201ENST00000333479 KRTAP5-2Q701N4 177 aa0.81□□□□□ -2.28
KNTC1-201ENST00000333479 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.8□□□□□ -2.28
KNTC1-201ENST00000333479 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
KNTC1-201ENST00000333479 KRTAP5-1Q6L8H4 278 aa0.72□□□□□ -2.29
KNTC1-201ENST00000333479 KRTAP4-4Q9BYR3 166 aa0.7□□□□□ -2.3
KNTC1-201ENST00000333479 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
KNTC1-201ENST00000333479 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
KNTC1-201ENST00000333479 KRTAP5-11Q6L8G4 156 aa0.64□□□□□ -2.31
KNTC1-201ENST00000333479 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 124.1 ms