RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 CCDC179H3BU77 68 aa4.63□□□□□ -1.67
CMTM1-203ENST00000333001 PRR15LQ9BU68 103 aa4.63□□□□□ -1.67
CMTM1-203ENST00000333001 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
CMTM1-203ENST00000333001 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
CMTM1-203ENST00000333001 A8MU10 97 aa4.55□□□□□ -1.68
CMTM1-203ENST00000333001 MT1EP04732 61 aa4.55□□□□□ -1.68
CMTM1-203ENST00000333001 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
CMTM1-203ENST00000333001 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
CMTM1-203ENST00000333001 TMEM258P61165 79 aa4.52□□□□□ -1.69
CMTM1-203ENST00000333001 TNP1P09430 55 aa4.5□□□□□ -1.69
CMTM1-203ENST00000333001 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
CMTM1-203ENST00000333001 MT1GP13640 62 aa4.46□□□□□ -1.7
CMTM1-203ENST00000333001 UQCR11O14957 56 aa4.45□□□□□ -1.7
CMTM1-203ENST00000333001 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
CMTM1-203ENST00000333001 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
CMTM1-203ENST00000333001 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
CMTM1-203ENST00000333001 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
CMTM1-203ENST00000333001 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
CMTM1-203ENST00000333001 MT1LQ93083 61 aa4.35□□□□□ -1.71
CMTM1-203ENST00000333001 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
CMTM1-203ENST00000333001 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
CMTM1-203ENST00000333001 MT1MQ8N339 61 aa4.33□□□□□ -1.72
CMTM1-203ENST00000333001 V9GYY9 64 aa4.33□□□□□ -1.72
CMTM1-203ENST00000333001 K7ERS5 55 aa4.31□□□□□ -1.72
CMTM1-203ENST00000333001 MT4P47944 62 aa4.28□□□□□ -1.72
CMTM1-203ENST00000333001 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
CMTM1-203ENST00000333001 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
CMTM1-203ENST00000333001 Q1T7F1 81 aa4.25□□□□□ -1.73
CMTM1-203ENST00000333001 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
CMTM1-203ENST00000333001 PSPHP1O15172 72 aa4.22□□□□□ -1.73
CMTM1-203ENST00000333001 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
CMTM1-203ENST00000333001 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
CMTM1-203ENST00000333001 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
CMTM1-203ENST00000333001 A6NED7 52 aa4.12□□□□□ -1.75
CMTM1-203ENST00000333001 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
CMTM1-203ENST00000333001 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
CMTM1-203ENST00000333001 CDC42SE1Q9NRR8 79 aa4.04□□□□□ -1.76
CMTM1-203ENST00000333001 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
CMTM1-203ENST00000333001 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
CMTM1-203ENST00000333001 ROMO1P60602 79 aa3.96□□□□□ -1.78
CMTM1-203ENST00000333001 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
CMTM1-203ENST00000333001 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
CMTM1-203ENST00000333001 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
CMTM1-203ENST00000333001 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
CMTM1-203ENST00000333001 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
CMTM1-203ENST00000333001 MT1AP04731 61 aa3.72□□□□□ -1.81
CMTM1-203ENST00000333001 MT3P25713 68 aa3.7□□□□□ -1.82
CMTM1-203ENST00000333001 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
CMTM1-203ENST00000333001 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
CMTM1-203ENST00000333001 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
CMTM1-203ENST00000333001 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
CMTM1-203ENST00000333001 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
CMTM1-203ENST00000333001 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
CMTM1-203ENST00000333001 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
CMTM1-203ENST00000333001 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
CMTM1-203ENST00000333001 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
CMTM1-203ENST00000333001 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
CMTM1-203ENST00000333001 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
CMTM1-203ENST00000333001 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
CMTM1-203ENST00000333001 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
CMTM1-203ENST00000333001 PMAIP1Q13794 54 aa3.34□□□□□ -1.87
CMTM1-203ENST00000333001 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
CMTM1-203ENST00000333001 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
CMTM1-203ENST00000333001 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
CMTM1-203ENST00000333001 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CMTM1-203ENST00000333001 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
CMTM1-203ENST00000333001 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
CMTM1-203ENST00000333001 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CMTM1-203ENST00000333001 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CMTM1-203ENST00000333001 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
CMTM1-203ENST00000333001 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
CMTM1-203ENST00000333001 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CMTM1-203ENST00000333001 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
CMTM1-203ENST00000333001 INE1O15225 51 aa2.17□□□□□ -2.06
CMTM1-203ENST00000333001 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
CMTM1-203ENST00000333001 PRM1P04553 51 aa1.99□□□□□ -2.09
CMTM1-203ENST00000333001 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
CMTM1-203ENST00000333001 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 44.8 ms