RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
TRAIP-201ENST00000331456 MT1EP04732 61 aa5.01□□□□□ -1.61
TRAIP-201ENST00000331456 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
TRAIP-201ENST00000331456 MT1LQ93083 61 aa4.94□□□□□ -1.62
TRAIP-201ENST00000331456 NEBP20929 6669 aa4.83□□□□□ -1.64
TRAIP-201ENST00000331456 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
TRAIP-201ENST00000331456 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
TRAIP-201ENST00000331456 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
TRAIP-201ENST00000331456 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
TRAIP-201ENST00000331456 MT1GP13640 62 aa4.75□□□□□ -1.65
TRAIP-201ENST00000331456 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
TRAIP-201ENST00000331456 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
TRAIP-201ENST00000331456 MT1MQ8N339 61 aa4.7□□□□□ -1.66
TRAIP-201ENST00000331456 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
TRAIP-201ENST00000331456 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
TRAIP-201ENST00000331456 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
TRAIP-201ENST00000331456 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
TRAIP-201ENST00000331456 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
TRAIP-201ENST00000331456 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
TRAIP-201ENST00000331456 SPRR2EP22531 72 aa4.52□□□□□ -1.69
TRAIP-201ENST00000331456 SPRR2BP35325 72 aa4.52□□□□□ -1.69
TRAIP-201ENST00000331456 SPRR2AP35326 72 aa4.52□□□□□ -1.69
TRAIP-201ENST00000331456 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
TRAIP-201ENST00000331456 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
TRAIP-201ENST00000331456 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
TRAIP-201ENST00000331456 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
TRAIP-201ENST00000331456 SPRR2DP22532 72 aa4.38□□□□□ -1.71
TRAIP-201ENST00000331456 INE1O15225 51 aa4.36□□□□□ -1.71
TRAIP-201ENST00000331456 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
TRAIP-201ENST00000331456 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
TRAIP-201ENST00000331456 MT1AP04731 61 aa4.2□□□□□ -1.74
TRAIP-201ENST00000331456 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
TRAIP-201ENST00000331456 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
TRAIP-201ENST00000331456 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
TRAIP-201ENST00000331456 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
TRAIP-201ENST00000331456 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
TRAIP-201ENST00000331456 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
TRAIP-201ENST00000331456 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
TRAIP-201ENST00000331456 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
TRAIP-201ENST00000331456 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
TRAIP-201ENST00000331456 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
TRAIP-201ENST00000331456 MT4P47944 62 aa3.83□□□□□ -1.8
TRAIP-201ENST00000331456 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
TRAIP-201ENST00000331456 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
TRAIP-201ENST00000331456 MT3P25713 68 aa3.81□□□□□ -1.8
TRAIP-201ENST00000331456 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
TRAIP-201ENST00000331456 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
TRAIP-201ENST00000331456 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
TRAIP-201ENST00000331456 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
TRAIP-201ENST00000331456 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
TRAIP-201ENST00000331456 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.82
TRAIP-201ENST00000331456 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
TRAIP-201ENST00000331456 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
TRAIP-201ENST00000331456 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
TRAIP-201ENST00000331456 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
TRAIP-201ENST00000331456 PRM1P04553 51 aa3.36□□□□□ -1.87
TRAIP-201ENST00000331456 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
TRAIP-201ENST00000331456 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
TRAIP-201ENST00000331456 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
TRAIP-201ENST00000331456 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
TRAIP-201ENST00000331456 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
TRAIP-201ENST00000331456 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
TRAIP-201ENST00000331456 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
TRAIP-201ENST00000331456 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
TRAIP-201ENST00000331456 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
TRAIP-201ENST00000331456 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
TRAIP-201ENST00000331456 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
TRAIP-201ENST00000331456 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
TRAIP-201ENST00000331456 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
TRAIP-201ENST00000331456 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
TRAIP-201ENST00000331456 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
TRAIP-201ENST00000331456 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
TRAIP-201ENST00000331456 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
TRAIP-201ENST00000331456 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
TRAIP-201ENST00000331456 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
TRAIP-201ENST00000331456 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
TRAIP-201ENST00000331456 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 110.6 ms