RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
PRKCD-201ENST00000330452 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
PRKCD-201ENST00000330452 MT1EP04732 61 aa5.78□□□□□ -1.48
PRKCD-201ENST00000330452 MT1LQ93083 61 aa5.78□□□□□ -1.48
PRKCD-201ENST00000330452 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
PRKCD-201ENST00000330452 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
PRKCD-201ENST00000330452 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
PRKCD-201ENST00000330452 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.51
PRKCD-201ENST00000330452 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
PRKCD-201ENST00000330452 MDN1Q9NU22 5596 aa5.59□□□□□ -1.51
PRKCD-201ENST00000330452 SPRR2FQ96RM1 72 aa5.54□□□□□ -1.52
PRKCD-201ENST00000330452 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
PRKCD-201ENST00000330452 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
PRKCD-201ENST00000330452 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
PRKCD-201ENST00000330452 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
PRKCD-201ENST00000330452 MT1GP13640 62 aa5.44□□□□□ -1.54
PRKCD-201ENST00000330452 MT1MQ8N339 61 aa5.41□□□□□ -1.54
PRKCD-201ENST00000330452 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.54
PRKCD-201ENST00000330452 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
PRKCD-201ENST00000330452 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
PRKCD-201ENST00000330452 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
PRKCD-201ENST00000330452 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
PRKCD-201ENST00000330452 PRM1P04553 51 aa5.18□□□□□ -1.58
PRKCD-201ENST00000330452 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
PRKCD-201ENST00000330452 SPRR2EP22531 72 aa5.11□□□□□ -1.59
PRKCD-201ENST00000330452 SPRR2BP35325 72 aa5.11□□□□□ -1.59
PRKCD-201ENST00000330452 SPRR2AP35326 72 aa5.11□□□□□ -1.59
PRKCD-201ENST00000330452 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
PRKCD-201ENST00000330452 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
PRKCD-201ENST00000330452 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
PRKCD-201ENST00000330452 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
PRKCD-201ENST00000330452 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
PRKCD-201ENST00000330452 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
PRKCD-201ENST00000330452 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
PRKCD-201ENST00000330452 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
PRKCD-201ENST00000330452 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
PRKCD-201ENST00000330452 SPRR2DP22532 72 aa4.88□□□□□ -1.63
PRKCD-201ENST00000330452 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
PRKCD-201ENST00000330452 MT1AP04731 61 aa4.84□□□□□ -1.63
PRKCD-201ENST00000330452 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
PRKCD-201ENST00000330452 NEBP20929 6669 aa4.75□□□□□ -1.65
PRKCD-201ENST00000330452 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
PRKCD-201ENST00000330452 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
PRKCD-201ENST00000330452 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
PRKCD-201ENST00000330452 MT4P47944 62 aa4.45□□□□□ -1.7
PRKCD-201ENST00000330452 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
PRKCD-201ENST00000330452 MT3P25713 68 aa4.34□□□□□ -1.72
PRKCD-201ENST00000330452 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
PRKCD-201ENST00000330452 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.73
PRKCD-201ENST00000330452 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
PRKCD-201ENST00000330452 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
PRKCD-201ENST00000330452 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
PRKCD-201ENST00000330452 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
PRKCD-201ENST00000330452 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.78
PRKCD-201ENST00000330452 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
PRKCD-201ENST00000330452 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
PRKCD-201ENST00000330452 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
PRKCD-201ENST00000330452 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
PRKCD-201ENST00000330452 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
PRKCD-201ENST00000330452 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
PRKCD-201ENST00000330452 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
PRKCD-201ENST00000330452 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
PRKCD-201ENST00000330452 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
PRKCD-201ENST00000330452 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
PRKCD-201ENST00000330452 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
PRKCD-201ENST00000330452 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
PRKCD-201ENST00000330452 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PRKCD-201ENST00000330452 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
PRKCD-201ENST00000330452 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
PRKCD-201ENST00000330452 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
PRKCD-201ENST00000330452 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
PRKCD-201ENST00000330452 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
PRKCD-201ENST00000330452 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
PRKCD-201ENST00000330452 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
PRKCD-201ENST00000330452 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
PRKCD-201ENST00000330452 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
PRKCD-201ENST00000330452 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 349.3 ms