RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
RGPD6-202ENST00000330331 MT1LQ93083 61 aa4.98□□□□□ -1.61
RGPD6-202ENST00000330331 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
RGPD6-202ENST00000330331 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
RGPD6-202ENST00000330331 MT1EP04732 61 aa4.88□□□□□ -1.63
RGPD6-202ENST00000330331 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
RGPD6-202ENST00000330331 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
RGPD6-202ENST00000330331 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
RGPD6-202ENST00000330331 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
RGPD6-202ENST00000330331 MT1GP13640 62 aa4.81□□□□□ -1.64
RGPD6-202ENST00000330331 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
RGPD6-202ENST00000330331 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
RGPD6-202ENST00000330331 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
RGPD6-202ENST00000330331 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.66
RGPD6-202ENST00000330331 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
RGPD6-202ENST00000330331 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
RGPD6-202ENST00000330331 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
RGPD6-202ENST00000330331 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
RGPD6-202ENST00000330331 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
RGPD6-202ENST00000330331 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
RGPD6-202ENST00000330331 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
RGPD6-202ENST00000330331 PRM1P04553 51 aa4.53□□□□□ -1.68
RGPD6-202ENST00000330331 MT1MQ8N339 61 aa4.53□□□□□ -1.68
RGPD6-202ENST00000330331 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
RGPD6-202ENST00000330331 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
RGPD6-202ENST00000330331 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
RGPD6-202ENST00000330331 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
RGPD6-202ENST00000330331 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
RGPD6-202ENST00000330331 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
RGPD6-202ENST00000330331 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
RGPD6-202ENST00000330331 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
RGPD6-202ENST00000330331 MT1AP04731 61 aa4.38□□□□□ -1.71
RGPD6-202ENST00000330331 SPRR2EP22531 72 aa4.38□□□□□ -1.71
RGPD6-202ENST00000330331 SPRR2BP35325 72 aa4.38□□□□□ -1.71
RGPD6-202ENST00000330331 SPRR2AP35326 72 aa4.38□□□□□ -1.71
RGPD6-202ENST00000330331 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
RGPD6-202ENST00000330331 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
RGPD6-202ENST00000330331 SPRR2DP22532 72 aa4.21□□□□□ -1.74
RGPD6-202ENST00000330331 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
RGPD6-202ENST00000330331 NEBP20929 6669 aa4.17□□□□□ -1.74
RGPD6-202ENST00000330331 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
RGPD6-202ENST00000330331 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
RGPD6-202ENST00000330331 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
RGPD6-202ENST00000330331 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
RGPD6-202ENST00000330331 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
RGPD6-202ENST00000330331 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
RGPD6-202ENST00000330331 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
RGPD6-202ENST00000330331 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
RGPD6-202ENST00000330331 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
RGPD6-202ENST00000330331 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
RGPD6-202ENST00000330331 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
RGPD6-202ENST00000330331 MT4P47944 62 aa3.69□□□□□ -1.82
RGPD6-202ENST00000330331 MT3P25713 68 aa3.67□□□□□ -1.82
RGPD6-202ENST00000330331 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
RGPD6-202ENST00000330331 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
RGPD6-202ENST00000330331 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
RGPD6-202ENST00000330331 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
RGPD6-202ENST00000330331 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
RGPD6-202ENST00000330331 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
RGPD6-202ENST00000330331 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
RGPD6-202ENST00000330331 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
RGPD6-202ENST00000330331 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
RGPD6-202ENST00000330331 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
RGPD6-202ENST00000330331 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
RGPD6-202ENST00000330331 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
RGPD6-202ENST00000330331 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
RGPD6-202ENST00000330331 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
RGPD6-202ENST00000330331 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
RGPD6-202ENST00000330331 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.97
RGPD6-202ENST00000330331 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
RGPD6-202ENST00000330331 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
RGPD6-202ENST00000330331 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
RGPD6-202ENST00000330331 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
RGPD6-202ENST00000330331 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
RGPD6-202ENST00000330331 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
RGPD6-202ENST00000330331 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
RGPD6-202ENST00000330331 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 1193.1 ms