RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MDN1Q9NU22 5596 aa6.76□□□□□ -1.33
EXOSC3-201ENST00000327304 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
EXOSC3-201ENST00000327304 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
EXOSC3-201ENST00000327304 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
EXOSC3-201ENST00000327304 SPRR2EP22531 72 aa6.67□□□□□ -1.34
EXOSC3-201ENST00000327304 SPRR2BP35325 72 aa6.67□□□□□ -1.34
EXOSC3-201ENST00000327304 SPRR2AP35326 72 aa6.67□□□□□ -1.34
EXOSC3-201ENST00000327304 MT1LQ93083 61 aa6.67□□□□□ -1.34
EXOSC3-201ENST00000327304 KRTAP19-4Q3LI73 84 aa6.66□□□□□ -1.34
EXOSC3-201ENST00000327304 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
EXOSC3-201ENST00000327304 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
EXOSC3-201ENST00000327304 NEBP20929 6669 aa6.61□□□□□ -1.35
EXOSC3-201ENST00000327304 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
EXOSC3-201ENST00000327304 NDUFAF8A1L188 74 aa6.6□□□□□ -1.35
EXOSC3-201ENST00000327304 LCE5AQ5TCM9 118 aa6.56□□□□□ -1.36
EXOSC3-201ENST00000327304 MT1GP13640 62 aa6.54□□□□□ -1.36
EXOSC3-201ENST00000327304 MT1MQ8N339 61 aa6.48□□□□□ -1.37
EXOSC3-201ENST00000327304 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
EXOSC3-201ENST00000327304 SPRR2DP22532 72 aa6.43□□□□□ -1.38
EXOSC3-201ENST00000327304 KRTAP4-3Q9BYR4 195 aa6.36□□□□□ -1.39
EXOSC3-201ENST00000327304 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
EXOSC3-201ENST00000327304 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
EXOSC3-201ENST00000327304 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
EXOSC3-201ENST00000327304 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
EXOSC3-201ENST00000327304 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
EXOSC3-201ENST00000327304 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.43
EXOSC3-201ENST00000327304 H3BS24 57 aa6.04□□□□□ -1.44
EXOSC3-201ENST00000327304 KRTAP2-2Q9BYT5 123 aa6□□□□□ -1.45
EXOSC3-201ENST00000327304 KRTAP2-1Q9BYU5 128 aa6□□□□□ -1.45
EXOSC3-201ENST00000327304 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
EXOSC3-201ENST00000327304 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
EXOSC3-201ENST00000327304 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
EXOSC3-201ENST00000327304 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
EXOSC3-201ENST00000327304 MT1AP04731 61 aa5.67□□□□□ -1.5
EXOSC3-201ENST00000327304 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
EXOSC3-201ENST00000327304 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
EXOSC3-201ENST00000327304 MT4P47944 62 aa5.6□□□□□ -1.51
EXOSC3-201ENST00000327304 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
EXOSC3-201ENST00000327304 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
EXOSC3-201ENST00000327304 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
EXOSC3-201ENST00000327304 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
EXOSC3-201ENST00000327304 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
EXOSC3-201ENST00000327304 HMCN1Q96RW7 5635 aa5.51□□□□□ -1.53
EXOSC3-201ENST00000327304 KRTAP12-4P60329 112 aa5.51□□□□□ -1.53
EXOSC3-201ENST00000327304 INE1O15225 51 aa5.49□□□□□ -1.53
EXOSC3-201ENST00000327304 KRTAP20-2Q3LI61 65 aa5.39□□□□□ -1.55
EXOSC3-201ENST00000327304 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
EXOSC3-201ENST00000327304 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
EXOSC3-201ENST00000327304 KRTAP4-2Q9BYR5 136 aa5.2□□□□□ -1.58
EXOSC3-201ENST00000327304 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
EXOSC3-201ENST00000327304 MT3P25713 68 aa5.13□□□□□ -1.59
EXOSC3-201ENST00000327304 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
EXOSC3-201ENST00000327304 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
EXOSC3-201ENST00000327304 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
EXOSC3-201ENST00000327304 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
EXOSC3-201ENST00000327304 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
EXOSC3-201ENST00000327304 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
EXOSC3-201ENST00000327304 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
EXOSC3-201ENST00000327304 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
EXOSC3-201ENST00000327304 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
EXOSC3-201ENST00000327304 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
EXOSC3-201ENST00000327304 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
EXOSC3-201ENST00000327304 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
EXOSC3-201ENST00000327304 PRM1P04553 51 aa4.31□□□□□ -1.72
EXOSC3-201ENST00000327304 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
EXOSC3-201ENST00000327304 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
EXOSC3-201ENST00000327304 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-201ENST00000327304 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
EXOSC3-201ENST00000327304 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
EXOSC3-201ENST00000327304 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
EXOSC3-201ENST00000327304 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
EXOSC3-201ENST00000327304 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
EXOSC3-201ENST00000327304 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
EXOSC3-201ENST00000327304 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
EXOSC3-201ENST00000327304 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
EXOSC3-201ENST00000327304 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
EXOSC3-201ENST00000327304 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 58.9 ms