RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 SERP1Q9Y6X1 66 aa2.87□□□□□ -1.95
CCNC-201ENST00000326298 H7BZZ5 65 aa2.85□□□□□ -1.95
CCNC-201ENST00000326298 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
CCNC-201ENST00000326298 SEC61GP60059 68 aa2.85□□□□□ -1.95
CCNC-201ENST00000326298 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
CCNC-201ENST00000326298 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
CCNC-201ENST00000326298 COX7CP15954 63 aa2.83□□□□□ -1.96
CCNC-201ENST00000326298 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
CCNC-201ENST00000326298 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
CCNC-201ENST00000326298 A0A1B0GU69 56 aa2.77□□□□□ -1.97
CCNC-201ENST00000326298 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
CCNC-201ENST00000326298 SMIM26A0A096LP01 95 aa2.74□□□□□ -1.97
CCNC-201ENST00000326298 TNP1P09430 55 aa2.74□□□□□ -1.97
CCNC-201ENST00000326298 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
CCNC-201ENST00000326298 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
CCNC-201ENST00000326298 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
CCNC-201ENST00000326298 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
CCNC-201ENST00000326298 CCDC179H3BU77 68 aa2.69□□□□□ -1.98
CCNC-201ENST00000326298 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
CCNC-201ENST00000326298 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
CCNC-201ENST00000326298 ANAPC13Q9BS18 74 aa2.66□□□□□ -1.98
CCNC-201ENST00000326298 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
CCNC-201ENST00000326298 LINC01558Q9Y6Z2 57 aa2.62□□□□□ -1.99
CCNC-201ENST00000326298 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
CCNC-201ENST00000326298 H3BS24 57 aa2.61□□□□□ -1.99
CCNC-201ENST00000326298 PRR15LQ9BU68 103 aa2.59□□□□□ -1.99
CCNC-201ENST00000326298 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
CCNC-201ENST00000326298 UQCR11O14957 56 aa2.55□□□□□ -2
CCNC-201ENST00000326298 KRTAP12-4P60329 112 aa2.55□□□□□ -2
CCNC-201ENST00000326298 ATP5EP56381 51 aaPredicted RBP2.54□□□□□ -2
CCNC-201ENST00000326298 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
CCNC-201ENST00000326298 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
CCNC-201ENST00000326298 MIR22HGQ0VDD5 57 aa2.5□□□□□ -2.01
CCNC-201ENST00000326298 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
CCNC-201ENST00000326298 KRTAP15-1Q3LI76 137 aa2.48□□□□□ -2.01
CCNC-201ENST00000326298 TMEM258P61165 79 aa2.48□□□□□ -2.01
CCNC-201ENST00000326298 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
CCNC-201ENST00000326298 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
CCNC-201ENST00000326298 PSPHP1O15172 72 aa2.46□□□□□ -2.02
CCNC-201ENST00000326298 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
CCNC-201ENST00000326298 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
CCNC-201ENST00000326298 MT1AP04731 61 aa2.42□□□□□ -2.02
CCNC-201ENST00000326298 KRTAP23-1A1A580 65 aa2.4□□□□□ -2.03
CCNC-201ENST00000326298 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
CCNC-201ENST00000326298 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CCNC-201ENST00000326298 K7ERS5 55 aa2.38□□□□□ -2.03
CCNC-201ENST00000326298 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
CCNC-201ENST00000326298 Q1T7F1 81 aa2.37□□□□□ -2.03
CCNC-201ENST00000326298 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
CCNC-201ENST00000326298 A6NED7 52 aa2.31□□□□□ -2.04
CCNC-201ENST00000326298 V9GYY9 64 aa2.3□□□□□ -2.04
CCNC-201ENST00000326298 CDC42SE1Q9NRR8 79 aa2.3□□□□□ -2.04
CCNC-201ENST00000326298 ROMO1P60602 79 aa2.29□□□□□ -2.04
CCNC-201ENST00000326298 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
CCNC-201ENST00000326298 RPS28P62857 69 aaKnown RBP2.25□□□□□ -2.05
CCNC-201ENST00000326298 MT3P25713 68 aa2.2□□□□□ -2.06
CCNC-201ENST00000326298 PCP4P48539 62 aa2.02□□□□□ -2.09
CCNC-201ENST00000326298 SVIPQ8NHG7 77 aa2.02□□□□□ -2.09
CCNC-201ENST00000326298 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
CCNC-201ENST00000326298 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
CCNC-201ENST00000326298 BRK1Q8WUW1 75 aa1.86□□□□□ -2.11
CCNC-201ENST00000326298 PRAC1Q96KF2 57 aa1.79□□□□□ -2.12
CCNC-201ENST00000326298 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
CCNC-201ENST00000326298 PMAIP1Q13794 54 aa1.72□□□□□ -2.13
CCNC-201ENST00000326298 LCE1FQ5T754 118 aa1.66□□□□□ -2.14
CCNC-201ENST00000326298 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
CCNC-201ENST00000326298 LCE3EQ5T5B0 92 aa1.63□□□□□ -2.15
CCNC-201ENST00000326298 A0A0A0MQY5 61 aa1.61□□□□□ -2.15
CCNC-201ENST00000326298 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
CCNC-201ENST00000326298 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
CCNC-201ENST00000326298 PRO0628Q9UI54 55 aa1.45□□□□□ -2.18
CCNC-201ENST00000326298 KTN1-AS1Q86SY8 53 aa1.43□□□□□ -2.18
CCNC-201ENST00000326298 LUZP6Q538Z0 58 aa1.37□□□□□ -2.19
CCNC-201ENST00000326298 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
CCNC-201ENST00000326298 PRM1P04553 51 aa1.2□□□□□ -2.22
CCNC-201ENST00000326298 NDUFAF8A1L188 74 aa1.19□□□□□ -2.22
CCNC-201ENST00000326298 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
CCNC-201ENST00000326298 INE1O15225 51 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 20.9 ms