RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
PRPF3-201ENST00000324862 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
PRPF3-201ENST00000324862 SPRR2EP22531 72 aa5.43□□□□□ -1.54
PRPF3-201ENST00000324862 SPRR2BP35325 72 aa5.43□□□□□ -1.54
PRPF3-201ENST00000324862 SPRR2AP35326 72 aa5.43□□□□□ -1.54
PRPF3-201ENST00000324862 NEBP20929 6669 aa5.42□□□□□ -1.54
PRPF3-201ENST00000324862 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.54
PRPF3-201ENST00000324862 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
PRPF3-201ENST00000324862 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
PRPF3-201ENST00000324862 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
PRPF3-201ENST00000324862 MT1GP13640 62 aa5.31□□□□□ -1.56
PRPF3-201ENST00000324862 MT1MQ8N339 61 aa5.29□□□□□ -1.56
PRPF3-201ENST00000324862 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
PRPF3-201ENST00000324862 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
PRPF3-201ENST00000324862 SPRR2DP22532 72 aa5.23□□□□□ -1.57
PRPF3-201ENST00000324862 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
PRPF3-201ENST00000324862 H3BS24 57 aa5.06□□□□□ -1.6
PRPF3-201ENST00000324862 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
PRPF3-201ENST00000324862 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
PRPF3-201ENST00000324862 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
PRPF3-201ENST00000324862 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
PRPF3-201ENST00000324862 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
PRPF3-201ENST00000324862 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
PRPF3-201ENST00000324862 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
PRPF3-201ENST00000324862 A0A0A0MQY5 61 aa4.9□□□□□ -1.62
PRPF3-201ENST00000324862 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
PRPF3-201ENST00000324862 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
PRPF3-201ENST00000324862 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
PRPF3-201ENST00000324862 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
PRPF3-201ENST00000324862 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.66
PRPF3-201ENST00000324862 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
PRPF3-201ENST00000324862 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
PRPF3-201ENST00000324862 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
PRPF3-201ENST00000324862 MT4P47944 62 aa4.61□□□□□ -1.67
PRPF3-201ENST00000324862 MT1AP04731 61 aa4.6□□□□□ -1.67
PRPF3-201ENST00000324862 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
PRPF3-201ENST00000324862 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
PRPF3-201ENST00000324862 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
PRPF3-201ENST00000324862 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
PRPF3-201ENST00000324862 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
PRPF3-201ENST00000324862 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
PRPF3-201ENST00000324862 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
PRPF3-201ENST00000324862 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
PRPF3-201ENST00000324862 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
PRPF3-201ENST00000324862 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
PRPF3-201ENST00000324862 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
PRPF3-201ENST00000324862 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
PRPF3-201ENST00000324862 MT3P25713 68 aa4.16□□□□□ -1.74
PRPF3-201ENST00000324862 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
PRPF3-201ENST00000324862 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
PRPF3-201ENST00000324862 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
PRPF3-201ENST00000324862 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
PRPF3-201ENST00000324862 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
PRPF3-201ENST00000324862 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
PRPF3-201ENST00000324862 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
PRPF3-201ENST00000324862 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
PRPF3-201ENST00000324862 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
PRPF3-201ENST00000324862 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
PRPF3-201ENST00000324862 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
PRPF3-201ENST00000324862 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
PRPF3-201ENST00000324862 INE1O15225 51 aa3.52□□□□□ -1.85
PRPF3-201ENST00000324862 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
PRPF3-201ENST00000324862 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
PRPF3-201ENST00000324862 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
PRPF3-201ENST00000324862 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
PRPF3-201ENST00000324862 PRM1P04553 51 aa3.21□□□□□ -1.9
PRPF3-201ENST00000324862 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
PRPF3-201ENST00000324862 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
PRPF3-201ENST00000324862 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
PRPF3-201ENST00000324862 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
PRPF3-201ENST00000324862 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
PRPF3-201ENST00000324862 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
PRPF3-201ENST00000324862 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
PRPF3-201ENST00000324862 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
PRPF3-201ENST00000324862 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
PRPF3-201ENST00000324862 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
PRPF3-201ENST00000324862 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 181.1 ms