RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 MT1EP04732 61 aa3.24□□□□□ -1.89
CD46-202ENST00000322918 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
CD46-202ENST00000322918 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
CD46-202ENST00000322918 MT1LQ93083 61 aa3.2□□□□□ -1.9
CD46-202ENST00000322918 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
CD46-202ENST00000322918 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
CD46-202ENST00000322918 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
CD46-202ENST00000322918 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
CD46-202ENST00000322918 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
CD46-202ENST00000322918 MT1GP13640 62 aa3.07□□□□□ -1.92
CD46-202ENST00000322918 MT1MQ8N339 61 aa3.06□□□□□ -1.92
CD46-202ENST00000322918 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
CD46-202ENST00000322918 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
CD46-202ENST00000322918 SPRR2EP22531 72 aa3.01□□□□□ -1.93
CD46-202ENST00000322918 SPRR2BP35325 72 aa3.01□□□□□ -1.93
CD46-202ENST00000322918 SPRR2AP35326 72 aa3.01□□□□□ -1.93
CD46-202ENST00000322918 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
CD46-202ENST00000322918 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
CD46-202ENST00000322918 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
CD46-202ENST00000322918 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
CD46-202ENST00000322918 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
CD46-202ENST00000322918 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
CD46-202ENST00000322918 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
CD46-202ENST00000322918 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
CD46-202ENST00000322918 KRTAP19-4Q3LI73 84 aa2.89□□□□□ -1.95
CD46-202ENST00000322918 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
CD46-202ENST00000322918 SPRR2DP22532 72 aa2.88□□□□□ -1.95
CD46-202ENST00000322918 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
CD46-202ENST00000322918 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.95
CD46-202ENST00000322918 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
CD46-202ENST00000322918 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
CD46-202ENST00000322918 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
CD46-202ENST00000322918 NEBP20929 6669 aa2.72□□□□□ -1.97
CD46-202ENST00000322918 KRTAP4-9Q9BYQ8 210 aa2.71□□□□□ -1.98
CD46-202ENST00000322918 MT1AP04731 61 aa2.66□□□□□ -1.98
CD46-202ENST00000322918 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
CD46-202ENST00000322918 MT4P47944 62 aa2.62□□□□□ -1.99
CD46-202ENST00000322918 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
CD46-202ENST00000322918 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
CD46-202ENST00000322918 KRTAP9-4Q9BYQ2 154 aa2.54□□□□□ -2
CD46-202ENST00000322918 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
CD46-202ENST00000322918 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
CD46-202ENST00000322918 PRM1P04553 51 aa2.48□□□□□ -2.01
CD46-202ENST00000322918 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
CD46-202ENST00000322918 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
CD46-202ENST00000322918 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
CD46-202ENST00000322918 LCE1DQ5T752 114 aa2.45□□□□□ -2.02
CD46-202ENST00000322918 MT3P25713 68 aa2.43□□□□□ -2.02
CD46-202ENST00000322918 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
CD46-202ENST00000322918 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.02
CD46-202ENST00000322918 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
CD46-202ENST00000322918 LCE4AQ5TA78 99 aa2.39□□□□□ -2.03
CD46-202ENST00000322918 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.03
CD46-202ENST00000322918 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CD46-202ENST00000322918 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
CD46-202ENST00000322918 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
CD46-202ENST00000322918 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
CD46-202ENST00000322918 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
CD46-202ENST00000322918 KRTAP4-11Q9BYQ6 195 aa2.11□□□□□ -2.07
CD46-202ENST00000322918 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
CD46-202ENST00000322918 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
CD46-202ENST00000322918 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
CD46-202ENST00000322918 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
CD46-202ENST00000322918 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
CD46-202ENST00000322918 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
CD46-202ENST00000322918 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
CD46-202ENST00000322918 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
CD46-202ENST00000322918 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
CD46-202ENST00000322918 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
CD46-202ENST00000322918 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
CD46-202ENST00000322918 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
CD46-202ENST00000322918 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CD46-202ENST00000322918 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
CD46-202ENST00000322918 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
CD46-202ENST00000322918 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
CD46-202ENST00000322918 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
CD46-202ENST00000322918 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 38.7 ms