RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 INE1O15225 51 aa7.02□□□□□ -1.29
PDZD3-201ENST00000322712 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
PDZD3-201ENST00000322712 MUC12Q9UKN1 5478 aa6.99□□□□□ -1.29
PDZD3-201ENST00000322712 KRTAP9-6A8MVA2 160 aa6.96□□□□□ -1.3
PDZD3-201ENST00000322712 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
PDZD3-201ENST00000322712 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
PDZD3-201ENST00000322712 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
PDZD3-201ENST00000322712 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
PDZD3-201ENST00000322712 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
PDZD3-201ENST00000322712 KRTAP5-9P26371 169 aa6.74□□□□□ -1.33
PDZD3-201ENST00000322712 MDN1Q9NU22 5596 aa6.72□□□□□ -1.33
PDZD3-201ENST00000322712 MT1MQ8N339 61 aa6.71□□□□□ -1.34
PDZD3-201ENST00000322712 MT1GP13640 62 aa6.69□□□□□ -1.34
PDZD3-201ENST00000322712 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.35
PDZD3-201ENST00000322712 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
PDZD3-201ENST00000322712 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
PDZD3-201ENST00000322712 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
PDZD3-201ENST00000322712 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
PDZD3-201ENST00000322712 SPRR2EP22531 72 aa6.54□□□□□ -1.36
PDZD3-201ENST00000322712 SPRR2BP35325 72 aa6.54□□□□□ -1.36
PDZD3-201ENST00000322712 SPRR2AP35326 72 aa6.54□□□□□ -1.36
PDZD3-201ENST00000322712 KRTAP2-3P0C7H8 128 aa6.53□□□□□ -1.36
PDZD3-201ENST00000322712 KRTAP2-4Q9BYR9 128 aa6.53□□□□□ -1.36
PDZD3-201ENST00000322712 KRTAP2-1Q9BYU5 128 aa6.53□□□□□ -1.36
PDZD3-201ENST00000322712 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
PDZD3-201ENST00000322712 SPRR2DP22532 72 aa6.3□□□□□ -1.4
PDZD3-201ENST00000322712 NEBP20929 6669 aa6.23□□□□□ -1.41
PDZD3-201ENST00000322712 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
PDZD3-201ENST00000322712 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
PDZD3-201ENST00000322712 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
PDZD3-201ENST00000322712 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
PDZD3-201ENST00000322712 MT1AP04731 61 aa5.93□□□□□ -1.46
PDZD3-201ENST00000322712 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
PDZD3-201ENST00000322712 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
PDZD3-201ENST00000322712 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
PDZD3-201ENST00000322712 KRTAP2-2Q9BYT5 123 aa5.66□□□□□ -1.5
PDZD3-201ENST00000322712 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
PDZD3-201ENST00000322712 KRTAP5-4Q6L8H1 288 aa5.62□□□□□ -1.51
PDZD3-201ENST00000322712 MT4P47944 62 aa5.52□□□□□ -1.53
PDZD3-201ENST00000322712 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
PDZD3-201ENST00000322712 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
PDZD3-201ENST00000322712 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
PDZD3-201ENST00000322712 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
PDZD3-201ENST00000322712 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
PDZD3-201ENST00000322712 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
PDZD3-201ENST00000322712 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
PDZD3-201ENST00000322712 MT3P25713 68 aa5.34□□□□□ -1.55
PDZD3-201ENST00000322712 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
PDZD3-201ENST00000322712 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
PDZD3-201ENST00000322712 PRM1P04553 51 aa5.13□□□□□ -1.59
PDZD3-201ENST00000322712 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
PDZD3-201ENST00000322712 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
PDZD3-201ENST00000322712 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
PDZD3-201ENST00000322712 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
PDZD3-201ENST00000322712 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
PDZD3-201ENST00000322712 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
PDZD3-201ENST00000322712 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
PDZD3-201ENST00000322712 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
PDZD3-201ENST00000322712 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
PDZD3-201ENST00000322712 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.7
PDZD3-201ENST00000322712 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
PDZD3-201ENST00000322712 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
PDZD3-201ENST00000322712 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
PDZD3-201ENST00000322712 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
PDZD3-201ENST00000322712 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
PDZD3-201ENST00000322712 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
PDZD3-201ENST00000322712 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
PDZD3-201ENST00000322712 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.78
PDZD3-201ENST00000322712 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
PDZD3-201ENST00000322712 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
PDZD3-201ENST00000322712 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
PDZD3-201ENST00000322712 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.85
PDZD3-201ENST00000322712 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
PDZD3-201ENST00000322712 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
PDZD3-201ENST00000322712 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
PDZD3-201ENST00000322712 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
PDZD3-201ENST00000322712 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms