RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 MUC12Q9UKN1 5478 aa11.03□□□□□ -0.64
NECTIN3-201ENST00000319792 KRTAP19-3Q7Z4W3 81 aa11.01□□□□□ -0.65
NECTIN3-201ENST00000319792 LCE3CQ5T5A8 94 aa10.94□□□□□ -0.66
NECTIN3-201ENST00000319792 MT1GP13640 62 aa10.9□□□□□ -0.66
NECTIN3-201ENST00000319792 LCE5AQ5TCM9 118 aa10.85□□□□□ -0.67
NECTIN3-201ENST00000319792 LCE1AQ5T7P2 110 aa10.84□□□□□ -0.67
NECTIN3-201ENST00000319792 SPRR5A0A1B0GTR4 108 aa10.83□□□□□ -0.68
NECTIN3-201ENST00000319792 MT1MQ8N339 61 aa10.78□□□□□ -0.68
NECTIN3-201ENST00000319792 SPRR2EP22531 72 aa10.74□□□□□ -0.69
NECTIN3-201ENST00000319792 SPRR2BP35325 72 aa10.74□□□□□ -0.69
NECTIN3-201ENST00000319792 SPRR2AP35326 72 aa10.74□□□□□ -0.69
NECTIN3-201ENST00000319792 KRTAP4-7Q9BYR0 210 aa10.74□□□□□ -0.69
NECTIN3-201ENST00000319792 MDN1Q9NU22 5596 aa10.7□□□□□ -0.7
NECTIN3-201ENST00000319792 KRTAP4-3Q9BYR4 195 aa10.5□□□□□ -0.73
NECTIN3-201ENST00000319792 NEBP20929 6669 aa10.44□□□□□ -0.74
NECTIN3-201ENST00000319792 SPRR2DP22532 72 aa10.36□□□□□ -0.75
NECTIN3-201ENST00000319792 KRTAP9-6A8MVA2 160 aa10.34□□□□□ -0.75
NECTIN3-201ENST00000319792 LUZP6Q538Z0 58 aa10.28□□□□□ -0.76
NECTIN3-201ENST00000319792 KRTAP20-1Q3LI63 56 aa10.13□□□□□ -0.79
NECTIN3-201ENST00000319792 LOC100996750A0A140TA64 210 aa10.09□□□□□ -0.79
NECTIN3-201ENST00000319792 DSTQ03001 7570 aaKnown RBP10.03□□□□□ -0.8
NECTIN3-201ENST00000319792 LCE3BQ5TA77 95 aa9.97□□□□□ -0.81
NECTIN3-201ENST00000319792 NDUFAF8A1L188 74 aa9.91□□□□□ -0.82
NECTIN3-201ENST00000319792 KRTAP2-3P0C7H8 128 aa9.87□□□□□ -0.83
NECTIN3-201ENST00000319792 KRTAP2-4Q9BYR9 128 aa9.87□□□□□ -0.83
NECTIN3-201ENST00000319792 KRTAP5-5Q701N2 237 aaPredicted RBP9.76□□□□□ -0.85
NECTIN3-201ENST00000319792 KRTAP2-2Q9BYT5 123 aa9.55□□□□□ -0.88
NECTIN3-201ENST00000319792 KRTAP2-1Q9BYU5 128 aa9.55□□□□□ -0.88
NECTIN3-201ENST00000319792 MT1AP04731 61 aa9.52□□□□□ -0.88
NECTIN3-201ENST00000319792 KRTAP5-4Q6L8H1 288 aa9.41□□□□□ -0.9
NECTIN3-201ENST00000319792 KRTAP6-1Q3LI64 71 aa9.4□□□□□ -0.91
NECTIN3-201ENST00000319792 LCE4AQ5TA78 99 aa9.24□□□□□ -0.93
NECTIN3-201ENST00000319792 SYNE1Q8NF91 8797 aaKnown RBP9.14□□□□□ -0.95
NECTIN3-201ENST00000319792 KRTAP12-4P60329 112 aa9.05□□□□□ -0.96
NECTIN3-201ENST00000319792 H3BS24 57 aa9.04□□□□□ -0.96
NECTIN3-201ENST00000319792 KRTAP9-4Q9BYQ2 154 aa9.04□□□□□ -0.96
NECTIN3-201ENST00000319792 MT4P47944 62 aa8.95□□□□□ -0.98
NECTIN3-201ENST00000319792 KRTAP4-6Q9BYQ5 205 aa8.9□□□□□ -0.98
NECTIN3-201ENST00000319792 KRTAP4-9Q9BYQ8 210 aa8.9□□□□□ -0.99
NECTIN3-201ENST00000319792 LCE1DQ5T752 114 aa8.87□□□□□ -0.99
NECTIN3-201ENST00000319792 KRTAP20-2Q3LI61 65 aa8.76□□□□□ -1.01
NECTIN3-201ENST00000319792 HMCN1Q96RW7 5635 aa8.7□□□□□ -1.02
NECTIN3-201ENST00000319792 KRTAP6-2Q3LI66 62 aa8.67□□□□□ -1.02
NECTIN3-201ENST00000319792 A0A0A0MQY5 61 aa8.66□□□□□ -1.02
NECTIN3-201ENST00000319792 MT3P25713 68 aa8.61□□□□□ -1.03
NECTIN3-201ENST00000319792 KRTAP5-2Q701N4 177 aa8.51□□□□□ -1.05
NECTIN3-201ENST00000319792 KRTAP5-3Q6L8H2 238 aa8.47□□□□□ -1.05
NECTIN3-201ENST00000319792 GPR98Q8WXG9 6306 aa8.42□□□□□ -1.06
NECTIN3-201ENST00000319792 INE1O15225 51 aa8.22□□□□□ -1.09
NECTIN3-201ENST00000319792 LCE3DQ9BYE3 92 aa8.17□□□□□ -1.1
NECTIN3-201ENST00000319792 AHNAK2Q8IVF2 5795 aa7.99□□□□□ -1.13
NECTIN3-201ENST00000319792 LCE3EQ5T5B0 92 aa7.93□□□□□ -1.14
NECTIN3-201ENST00000319792 KRTAP5-10Q6L8G5 202 aa7.92□□□□□ -1.14
NECTIN3-201ENST00000319792 OBSCNQ5VST9 7968 aa7.8□□□□□ -1.16
NECTIN3-201ENST00000319792 KRTAP5-7Q6L8G8 165 aa7.63□□□□□ -1.19
NECTIN3-201ENST00000319792 KRTAP4-11Q9BYQ6 195 aa7.62□□□□□ -1.19
NECTIN3-201ENST00000319792 LCE1EQ5T753 118 aa7.55□□□□□ -1.2
NECTIN3-201ENST00000319792 KRTAP5-8O75690 187 aa7.36□□□□□ -1.23
NECTIN3-201ENST00000319792 KRTAP5-1Q6L8H4 278 aa7.36□□□□□ -1.23
NECTIN3-201ENST00000319792 MUC5ACP98088 5654 aa7.06□□□□□ -1.28
NECTIN3-201ENST00000319792 KRTAP4-2Q9BYR5 136 aa7.04□□□□□ -1.28
NECTIN3-201ENST00000319792 LCE1CQ5T751 118 aa7.02□□□□□ -1.29
NECTIN3-201ENST00000319792 LCE1BQ5T7P3 118 aa7.02□□□□□ -1.29
NECTIN3-201ENST00000319792 KRTAP4-12Q9BQ66 201 aa6.96□□□□□ -1.3
NECTIN3-201ENST00000319792 KRTAP9-9Q9BYP9 154 aa6.89□□□□□ -1.31
NECTIN3-201ENST00000319792 PRM1P04553 51 aa6.82□□□□□ -1.32
NECTIN3-201ENST00000319792 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.59□□□□□ -1.35
NECTIN3-201ENST00000319792 MUC5BQ9HC84 5762 aaPredicted RBP6.56□□□□□ -1.36
NECTIN3-201ENST00000319792 AHNAKQ09666 5890 aaKnown RBP6.54□□□□□ -1.36
NECTIN3-201ENST00000319792 KRTAP5-11Q6L8G4 156 aa6.23□□□□□ -1.41
NECTIN3-201ENST00000319792 KRTAP21-2Q3LI59 83 aa6.18□□□□□ -1.42
NECTIN3-201ENST00000319792 LCE1FQ5T754 118 aa5.67□□□□□ -1.5
NECTIN3-201ENST00000319792 KRTAP4-4Q9BYR3 166 aa5.43□□□□□ -1.54
NECTIN3-201ENST00000319792 PHGR1C9JFL3 82 aa5.33□□□□□ -1.56
NECTIN3-201ENST00000319792 MUC19Q7Z5P9 8384 aa4.62□□□□□ -1.67
NECTIN3-201ENST00000319792 KRTAP21-1Q3LI58 79 aa4.17□□□□□ -1.74
NECTIN3-201ENST00000319792 MUC16Q8WXI7 14507 aa3.47□□□□□ -1.85
Retrieved 77 of 20,778 RNA–protein pairs in 9 ms