RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
LCLAT1-202ENST00000319406 MT1EP04732 61 aa3.53□□□□□ -1.84
LCLAT1-202ENST00000319406 MT1LQ93083 61 aa3.51□□□□□ -1.85
LCLAT1-202ENST00000319406 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
LCLAT1-202ENST00000319406 KRTAP19-4Q3LI73 84 aa3.5□□□□□ -1.85
LCLAT1-202ENST00000319406 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
LCLAT1-202ENST00000319406 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
LCLAT1-202ENST00000319406 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
LCLAT1-202ENST00000319406 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
LCLAT1-202ENST00000319406 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
LCLAT1-202ENST00000319406 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
LCLAT1-202ENST00000319406 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
LCLAT1-202ENST00000319406 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.88
LCLAT1-202ENST00000319406 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
LCLAT1-202ENST00000319406 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
LCLAT1-202ENST00000319406 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
LCLAT1-202ENST00000319406 MT1MQ8N339 61 aa3.3□□□□□ -1.88
LCLAT1-202ENST00000319406 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
LCLAT1-202ENST00000319406 MT1GP13640 62 aa3.28□□□□□ -1.88
LCLAT1-202ENST00000319406 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
LCLAT1-202ENST00000319406 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
LCLAT1-202ENST00000319406 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
LCLAT1-202ENST00000319406 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
LCLAT1-202ENST00000319406 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
LCLAT1-202ENST00000319406 LCE1DQ5T752 114 aa3.21□□□□□ -1.9
LCLAT1-202ENST00000319406 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
LCLAT1-202ENST00000319406 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
LCLAT1-202ENST00000319406 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
LCLAT1-202ENST00000319406 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
LCLAT1-202ENST00000319406 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
LCLAT1-202ENST00000319406 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
LCLAT1-202ENST00000319406 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
LCLAT1-202ENST00000319406 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
LCLAT1-202ENST00000319406 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
LCLAT1-202ENST00000319406 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
LCLAT1-202ENST00000319406 MT1AP04731 61 aa2.95□□□□□ -1.94
LCLAT1-202ENST00000319406 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
LCLAT1-202ENST00000319406 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
LCLAT1-202ENST00000319406 PRM1P04553 51 aa2.93□□□□□ -1.94
LCLAT1-202ENST00000319406 SPRR2EP22531 72 aa2.92□□□□□ -1.94
LCLAT1-202ENST00000319406 SPRR2BP35325 72 aa2.92□□□□□ -1.94
LCLAT1-202ENST00000319406 SPRR2AP35326 72 aa2.92□□□□□ -1.94
LCLAT1-202ENST00000319406 NEBP20929 6669 aa2.91□□□□□ -1.94
LCLAT1-202ENST00000319406 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
LCLAT1-202ENST00000319406 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
LCLAT1-202ENST00000319406 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
LCLAT1-202ENST00000319406 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
LCLAT1-202ENST00000319406 SPRR2DP22532 72 aa2.79□□□□□ -1.96
LCLAT1-202ENST00000319406 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
LCLAT1-202ENST00000319406 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
LCLAT1-202ENST00000319406 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
LCLAT1-202ENST00000319406 KRTAP2-2Q9BYT5 123 aa2.69□□□□□ -1.98
LCLAT1-202ENST00000319406 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
LCLAT1-202ENST00000319406 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
LCLAT1-202ENST00000319406 MT3P25713 68 aa2.63□□□□□ -1.99
LCLAT1-202ENST00000319406 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
LCLAT1-202ENST00000319406 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
LCLAT1-202ENST00000319406 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
LCLAT1-202ENST00000319406 MT4P47944 62 aa2.44□□□□□ -2.02
LCLAT1-202ENST00000319406 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
LCLAT1-202ENST00000319406 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
LCLAT1-202ENST00000319406 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
LCLAT1-202ENST00000319406 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
LCLAT1-202ENST00000319406 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
LCLAT1-202ENST00000319406 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
LCLAT1-202ENST00000319406 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
LCLAT1-202ENST00000319406 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
LCLAT1-202ENST00000319406 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
LCLAT1-202ENST00000319406 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
LCLAT1-202ENST00000319406 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
LCLAT1-202ENST00000319406 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
LCLAT1-202ENST00000319406 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
LCLAT1-202ENST00000319406 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
LCLAT1-202ENST00000319406 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
LCLAT1-202ENST00000319406 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
LCLAT1-202ENST00000319406 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
LCLAT1-202ENST00000319406 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 100.7 ms