RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 MT1BP07438 61 aa1.39□□□□□ -2.19
GEN1-201ENST00000317402 MT1XP80297 61 aa1.37□□□□□ -2.19
GEN1-201ENST00000317402 KRTAP9-3Q9BYQ3 159 aa1.37□□□□□ -2.19
GEN1-201ENST00000317402 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
GEN1-201ENST00000317402 LCE3CQ5T5A8 94 aa1.33□□□□□ -2.2
GEN1-201ENST00000317402 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
GEN1-201ENST00000317402 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
GEN1-201ENST00000317402 MT1GP13640 62 aa1.3□□□□□ -2.2
GEN1-201ENST00000317402 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
GEN1-201ENST00000317402 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
GEN1-201ENST00000317402 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
GEN1-201ENST00000317402 KRTAP9-7A8MTY7 169 aa1.21□□□□□ -2.22
GEN1-201ENST00000317402 LCE3BQ5TA77 95 aa1.2□□□□□ -2.22
GEN1-201ENST00000317402 PRM1P04553 51 aa1.19□□□□□ -2.22
GEN1-201ENST00000317402 SPRR2BP35325 72 aa1.19□□□□□ -2.22
GEN1-201ENST00000317402 KRTAP19-6Q3LI70 58 aa1.19□□□□□ -2.22
GEN1-201ENST00000317402 MT1LQ93083 61 aa1.19□□□□□ -2.22
GEN1-201ENST00000317402 MT1EP04732 61 aa1.18□□□□□ -2.22
GEN1-201ENST00000317402 SPRR2AP35326 72 aa1.17□□□□□ -2.22
GEN1-201ENST00000317402 LCE3DQ9BYE3 92 aa1.16□□□□□ -2.22
GEN1-201ENST00000317402 SPRR2EP22531 72 aa1.15□□□□□ -2.23
GEN1-201ENST00000317402 SPRR2DP22532 72 aa1.15□□□□□ -2.23
GEN1-201ENST00000317402 LCE3EQ5T5B0 92 aa1.15□□□□□ -2.23
GEN1-201ENST00000317402 KRTAP2-3P0C7H8 128 aa1.15□□□□□ -2.23
GEN1-201ENST00000317402 KRTAP2-4Q9BYR9 128 aa1.15□□□□□ -2.23
GEN1-201ENST00000317402 KRTAP2-1Q9BYU5 128 aa1.15□□□□□ -2.23
GEN1-201ENST00000317402 LCE1AQ5T7P2 110 aa1.13□□□□□ -2.23
GEN1-201ENST00000317402 KRTAP9-2Q9BYQ4 174 aa1.13□□□□□ -2.23
GEN1-201ENST00000317402 HMCN1Q96RW7 5635 aa1.13□□□□□ -2.23
GEN1-201ENST00000317402 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
GEN1-201ENST00000317402 LCE4AQ5TA78 99 aa1.11□□□□□ -2.23
GEN1-201ENST00000317402 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
GEN1-201ENST00000317402 MT1AP04731 61 aa1.1□□□□□ -2.23
GEN1-201ENST00000317402 MT1MQ8N339 61 aa1.1□□□□□ -2.23
GEN1-201ENST00000317402 MT4P47944 62 aa1.08□□□□□ -2.24
GEN1-201ENST00000317402 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
GEN1-201ENST00000317402 KRTAP5-5Q701N2 237 aaPredicted RBP1.06□□□□□ -2.24
GEN1-201ENST00000317402 GPR98Q8WXG9 6306 aa1.05□□□□□ -2.24
GEN1-201ENST00000317402 LCE5AQ5TCM9 118 aa1.04□□□□□ -2.24
GEN1-201ENST00000317402 KRTAP5-9P26371 169 aa1.04□□□□□ -2.24
GEN1-201ENST00000317402 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.24
GEN1-201ENST00000317402 LCE1EQ5T753 118 aa1.02□□□□□ -2.25
GEN1-201ENST00000317402 KRTAP4-6Q9BYQ5 205 aa1.02□□□□□ -2.25
GEN1-201ENST00000317402 KRTAP9-6A0A140TA67 174 aa1.02□□□□□ -2.25
GEN1-201ENST00000317402 KRTAP6-3Q3LI67 103 aa1□□□□□ -2.25
GEN1-201ENST00000317402 KRTAP6-2Q3LI66 62 aa0.99□□□□□ -2.25
GEN1-201ENST00000317402 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
GEN1-201ENST00000317402 MUC19Q7Z5P9 8384 aa0.99□□□□□ -2.25
GEN1-201ENST00000317402 KRTAP9-4Q9BYQ2 154 aa0.98□□□□□ -2.25
GEN1-201ENST00000317402 NEBP20929 6669 aa0.98□□□□□ -2.25
GEN1-201ENST00000317402 LCE1FQ5T754 118 aa0.97□□□□□ -2.25
GEN1-201ENST00000317402 LCE1DQ5T752 114 aa0.97□□□□□ -2.25
GEN1-201ENST00000317402 KRTAP2-2Q9BYT5 123 aa0.97□□□□□ -2.25
GEN1-201ENST00000317402 KRTAP9-9Q9BYP9 154 aa0.96□□□□□ -2.26
GEN1-201ENST00000317402 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.96□□□□□ -2.26
GEN1-201ENST00000317402 KRTAP4-4Q9BYR3 166 aa0.95□□□□□ -2.26
GEN1-201ENST00000317402 KRTAP20-1Q3LI63 56 aa0.93□□□□□ -2.26
GEN1-201ENST00000317402 LCE1BQ5T7P3 118 aa0.93□□□□□ -2.26
GEN1-201ENST00000317402 KRTAP4-11Q9BYQ6 195 aa0.93□□□□□ -2.26
GEN1-201ENST00000317402 KRTAP5-4Q6L8H1 288 aa0.93□□□□□ -2.26
GEN1-201ENST00000317402 MUC5ACP98088 5654 aa0.9□□□□□ -2.26
GEN1-201ENST00000317402 KRTAP4-12Q9BQ66 201 aa0.89□□□□□ -2.27
GEN1-201ENST00000317402 KRTAP4-2Q9BYR5 136 aa0.89□□□□□ -2.27
GEN1-201ENST00000317402 KRTAP5-7Q6L8G8 165 aa0.87□□□□□ -2.27
GEN1-201ENST00000317402 KRTAP5-2Q701N4 177 aa0.86□□□□□ -2.27
GEN1-201ENST00000317402 LCE1CQ5T751 118 aa0.83□□□□□ -2.28
GEN1-201ENST00000317402 KRTAP5-3Q6L8H2 238 aa0.8□□□□□ -2.28
GEN1-201ENST00000317402 KRTAP20-2Q3LI61 65 aa0.79□□□□□ -2.28
GEN1-201ENST00000317402 KRTAP5-8O75690 187 aa0.77□□□□□ -2.29
GEN1-201ENST00000317402 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.77□□□□□ -2.29
GEN1-201ENST00000317402 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
GEN1-201ENST00000317402 KRTAP5-1Q6L8H4 278 aa0.72□□□□□ -2.29
GEN1-201ENST00000317402 KRTAP5-11Q6L8G4 156 aa0.68□□□□□ -2.3
GEN1-201ENST00000317402 KRTAP21-2Q3LI59 83 aa0.62□□□□□ -2.31
GEN1-201ENST00000317402 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
GEN1-201ENST00000317402 PHGR1C9JFL3 82 aa0.53□□□□□ -2.33
GEN1-201ENST00000317402 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 46.9 ms