RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 LCE1AQ5T7P2 110 aa6.76□□□□□ -1.33
CDK4-202ENST00000312990 SPRR2EP22531 72 aa6.74□□□□□ -1.33
CDK4-202ENST00000312990 SPRR2BP35325 72 aa6.74□□□□□ -1.33
CDK4-202ENST00000312990 SPRR2AP35326 72 aa6.74□□□□□ -1.33
CDK4-202ENST00000312990 MT1LQ93083 61 aa6.69□□□□□ -1.34
CDK4-202ENST00000312990 KRTAP19-3Q7Z4W3 81 aa6.68□□□□□ -1.34
CDK4-202ENST00000312990 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
CDK4-202ENST00000312990 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
CDK4-202ENST00000312990 MT1GP13640 62 aa6.58□□□□□ -1.36
CDK4-202ENST00000312990 MT1MQ8N339 61 aa6.51□□□□□ -1.37
CDK4-202ENST00000312990 SPRR2DP22532 72 aa6.5□□□□□ -1.37
CDK4-202ENST00000312990 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
CDK4-202ENST00000312990 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
CDK4-202ENST00000312990 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
CDK4-202ENST00000312990 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
CDK4-202ENST00000312990 KRTAP4-3Q9BYR4 195 aa6.38□□□□□ -1.39
CDK4-202ENST00000312990 H3BS24 57 aa6.3□□□□□ -1.4
CDK4-202ENST00000312990 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
CDK4-202ENST00000312990 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
CDK4-202ENST00000312990 KRTAP20-1Q3LI63 56 aa6.26□□□□□ -1.41
CDK4-202ENST00000312990 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
CDK4-202ENST00000312990 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
CDK4-202ENST00000312990 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
CDK4-202ENST00000312990 KRTAP2-2Q9BYT5 123 aa6.1□□□□□ -1.43
CDK4-202ENST00000312990 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
CDK4-202ENST00000312990 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
CDK4-202ENST00000312990 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
CDK4-202ENST00000312990 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
CDK4-202ENST00000312990 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
CDK4-202ENST00000312990 LUZP6Q538Z0 58 aa5.9□□□□□ -1.47
CDK4-202ENST00000312990 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
CDK4-202ENST00000312990 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
CDK4-202ENST00000312990 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
CDK4-202ENST00000312990 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
CDK4-202ENST00000312990 MT1AP04731 61 aa5.68□□□□□ -1.5
CDK4-202ENST00000312990 MT4P47944 62 aa5.66□□□□□ -1.5
CDK4-202ENST00000312990 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.51
CDK4-202ENST00000312990 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
CDK4-202ENST00000312990 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
CDK4-202ENST00000312990 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
CDK4-202ENST00000312990 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
CDK4-202ENST00000312990 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
CDK4-202ENST00000312990 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
CDK4-202ENST00000312990 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
CDK4-202ENST00000312990 KRTAP6-2Q3LI66 62 aa5.26□□□□□ -1.57
CDK4-202ENST00000312990 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
CDK4-202ENST00000312990 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
CDK4-202ENST00000312990 MT3P25713 68 aa5.15□□□□□ -1.59
CDK4-202ENST00000312990 INE1O15225 51 aa5.12□□□□□ -1.59
CDK4-202ENST00000312990 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
CDK4-202ENST00000312990 GPR98Q8WXG9 6306 aa4.96□□□□□ -1.62
CDK4-202ENST00000312990 KRTAP5-10Q6L8G5 202 aa4.9□□□□□ -1.62
CDK4-202ENST00000312990 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
CDK4-202ENST00000312990 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
CDK4-202ENST00000312990 KRTAP5-8O75690 187 aa4.65□□□□□ -1.66
CDK4-202ENST00000312990 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
CDK4-202ENST00000312990 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
CDK4-202ENST00000312990 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
CDK4-202ENST00000312990 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
CDK4-202ENST00000312990 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
CDK4-202ENST00000312990 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
CDK4-202ENST00000312990 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
CDK4-202ENST00000312990 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
CDK4-202ENST00000312990 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
CDK4-202ENST00000312990 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
CDK4-202ENST00000312990 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
CDK4-202ENST00000312990 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
CDK4-202ENST00000312990 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
CDK4-202ENST00000312990 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
CDK4-202ENST00000312990 PRM1P04553 51 aa3.8□□□□□ -1.8
CDK4-202ENST00000312990 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.81
CDK4-202ENST00000312990 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
CDK4-202ENST00000312990 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
CDK4-202ENST00000312990 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
CDK4-202ENST00000312990 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
CDK4-202ENST00000312990 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
CDK4-202ENST00000312990 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms