RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
GFM1-202ENST00000312756 USH2AO75445 5202 aa3.29□□□□□ -1.88
GFM1-202ENST00000312756 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
GFM1-202ENST00000312756 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
GFM1-202ENST00000312756 MT1BP07438 61 aa3.24□□□□□ -1.89
GFM1-202ENST00000312756 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
GFM1-202ENST00000312756 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
GFM1-202ENST00000312756 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
GFM1-202ENST00000312756 MT1XP80297 61 aa3.11□□□□□ -1.91
GFM1-202ENST00000312756 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
GFM1-202ENST00000312756 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
GFM1-202ENST00000312756 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
GFM1-202ENST00000312756 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
GFM1-202ENST00000312756 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
GFM1-202ENST00000312756 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
GFM1-202ENST00000312756 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.92
GFM1-202ENST00000312756 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
GFM1-202ENST00000312756 TNP1P09430 55 aa3.02□□□□□ -1.93
GFM1-202ENST00000312756 KMT2DO14686 5537 aa3.02□□□□□ -1.93
GFM1-202ENST00000312756 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
GFM1-202ENST00000312756 KRTAP10-12P60413 245 aa2.99□□□□□ -1.93
GFM1-202ENST00000312756 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
GFM1-202ENST00000312756 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
GFM1-202ENST00000312756 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.94
GFM1-202ENST00000312756 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
GFM1-202ENST00000312756 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
GFM1-202ENST00000312756 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
GFM1-202ENST00000312756 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
GFM1-202ENST00000312756 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
GFM1-202ENST00000312756 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
GFM1-202ENST00000312756 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
GFM1-202ENST00000312756 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
GFM1-202ENST00000312756 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
GFM1-202ENST00000312756 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
GFM1-202ENST00000312756 MT1EP04732 61 aa2.72□□□□□ -1.97
GFM1-202ENST00000312756 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
GFM1-202ENST00000312756 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
GFM1-202ENST00000312756 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
GFM1-202ENST00000312756 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
GFM1-202ENST00000312756 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
GFM1-202ENST00000312756 NEBP20929 6669 aa2.67□□□□□ -1.98
GFM1-202ENST00000312756 SPRR2EP22531 72 aa2.67□□□□□ -1.98
GFM1-202ENST00000312756 SPRR2BP35325 72 aa2.67□□□□□ -1.98
GFM1-202ENST00000312756 SPRR2AP35326 72 aa2.67□□□□□ -1.98
GFM1-202ENST00000312756 MT1LQ93083 61 aa2.66□□□□□ -1.98
GFM1-202ENST00000312756 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
GFM1-202ENST00000312756 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
GFM1-202ENST00000312756 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
GFM1-202ENST00000312756 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
GFM1-202ENST00000312756 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
GFM1-202ENST00000312756 SPRR2DP22532 72 aa2.58□□□□□ -2
GFM1-202ENST00000312756 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
GFM1-202ENST00000312756 MT1MQ8N339 61 aa2.57□□□□□ -2
GFM1-202ENST00000312756 MT1GP13640 62 aa2.56□□□□□ -2
GFM1-202ENST00000312756 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
GFM1-202ENST00000312756 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
GFM1-202ENST00000312756 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
GFM1-202ENST00000312756 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
GFM1-202ENST00000312756 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
GFM1-202ENST00000312756 MT4P47944 62 aa2.26□□□□□ -2.05
GFM1-202ENST00000312756 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
GFM1-202ENST00000312756 PRM1P04553 51 aa2.25□□□□□ -2.05
GFM1-202ENST00000312756 MT1AP04731 61 aa2.23□□□□□ -2.05
GFM1-202ENST00000312756 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
GFM1-202ENST00000312756 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
GFM1-202ENST00000312756 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
GFM1-202ENST00000312756 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
GFM1-202ENST00000312756 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
GFM1-202ENST00000312756 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
GFM1-202ENST00000312756 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
GFM1-202ENST00000312756 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
GFM1-202ENST00000312756 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
GFM1-202ENST00000312756 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
GFM1-202ENST00000312756 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
GFM1-202ENST00000312756 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
GFM1-202ENST00000312756 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
GFM1-202ENST00000312756 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
GFM1-202ENST00000312756 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 68.6 ms