RNA–Protein interactions for RNA: ENST00000312492.2

HOXC5-201, Transcript of homeobox C5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC5, Length 1,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5-201ENST00000312492 INE1O15225 51 aa6.11□□□□□ -1.43
HOXC5-201ENST00000312492 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
HOXC5-201ENST00000312492 MT1LQ93083 61 aa6.03□□□□□ -1.44
HOXC5-201ENST00000312492 KRTAP6-3Q3LI67 103 aa6.02□□□□□ -1.45
HOXC5-201ENST00000312492 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
HOXC5-201ENST00000312492 NEBP20929 6669 aa6□□□□□ -1.45
HOXC5-201ENST00000312492 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
HOXC5-201ENST00000312492 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
HOXC5-201ENST00000312492 MUC12Q9UKN1 5478 aa5.87□□□□□ -1.47
HOXC5-201ENST00000312492 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
HOXC5-201ENST00000312492 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
HOXC5-201ENST00000312492 MT1GP13640 62 aa5.83□□□□□ -1.48
HOXC5-201ENST00000312492 KRTAP5-9P26371 169 aa5.81□□□□□ -1.48
HOXC5-201ENST00000312492 MT1MQ8N339 61 aa5.77□□□□□ -1.49
HOXC5-201ENST00000312492 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
HOXC5-201ENST00000312492 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
HOXC5-201ENST00000312492 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
HOXC5-201ENST00000312492 KRTAP4-3Q9BYR4 195 aa5.67□□□□□ -1.5
HOXC5-201ENST00000312492 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.5
HOXC5-201ENST00000312492 SPRR2EP22531 72 aa5.61□□□□□ -1.51
HOXC5-201ENST00000312492 SPRR2BP35325 72 aa5.61□□□□□ -1.51
HOXC5-201ENST00000312492 SPRR2AP35326 72 aa5.61□□□□□ -1.51
HOXC5-201ENST00000312492 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
HOXC5-201ENST00000312492 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
HOXC5-201ENST00000312492 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
HOXC5-201ENST00000312492 SPRR2DP22532 72 aa5.41□□□□□ -1.54
HOXC5-201ENST00000312492 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
HOXC5-201ENST00000312492 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
HOXC5-201ENST00000312492 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
HOXC5-201ENST00000312492 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
HOXC5-201ENST00000312492 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
HOXC5-201ENST00000312492 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
HOXC5-201ENST00000312492 MT1AP04731 61 aa5.13□□□□□ -1.59
HOXC5-201ENST00000312492 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
HOXC5-201ENST00000312492 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
HOXC5-201ENST00000312492 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
HOXC5-201ENST00000312492 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
HOXC5-201ENST00000312492 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
HOXC5-201ENST00000312492 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
HOXC5-201ENST00000312492 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
HOXC5-201ENST00000312492 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
HOXC5-201ENST00000312492 MT4P47944 62 aa4.69□□□□□ -1.66
HOXC5-201ENST00000312492 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
HOXC5-201ENST00000312492 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
HOXC5-201ENST00000312492 LCE1DQ5T752 114 aa4.65□□□□□ -1.66
HOXC5-201ENST00000312492 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
HOXC5-201ENST00000312492 MT3P25713 68 aa4.64□□□□□ -1.67
HOXC5-201ENST00000312492 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
HOXC5-201ENST00000312492 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
HOXC5-201ENST00000312492 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
HOXC5-201ENST00000312492 KRTAP5-7Q6L8G8 165 aa4.51□□□□□ -1.69
HOXC5-201ENST00000312492 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
HOXC5-201ENST00000312492 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
HOXC5-201ENST00000312492 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
HOXC5-201ENST00000312492 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
HOXC5-201ENST00000312492 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
HOXC5-201ENST00000312492 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
HOXC5-201ENST00000312492 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
HOXC5-201ENST00000312492 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
HOXC5-201ENST00000312492 PRM1P04553 51 aa3.95□□□□□ -1.78
HOXC5-201ENST00000312492 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
HOXC5-201ENST00000312492 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
HOXC5-201ENST00000312492 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
HOXC5-201ENST00000312492 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
HOXC5-201ENST00000312492 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
HOXC5-201ENST00000312492 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
HOXC5-201ENST00000312492 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
HOXC5-201ENST00000312492 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
HOXC5-201ENST00000312492 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
HOXC5-201ENST00000312492 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
HOXC5-201ENST00000312492 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
HOXC5-201ENST00000312492 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
HOXC5-201ENST00000312492 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
HOXC5-201ENST00000312492 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
HOXC5-201ENST00000312492 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
HOXC5-201ENST00000312492 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
HOXC5-201ENST00000312492 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 105.2 ms