RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 SPRR2EP22531 72 aa6.66□□□□□ -1.34
SWSAP1-201ENST00000312423 SPRR2BP35325 72 aa6.66□□□□□ -1.34
SWSAP1-201ENST00000312423 SPRR2AP35326 72 aa6.66□□□□□ -1.34
SWSAP1-201ENST00000312423 LCE1AQ5T7P2 110 aa6.58□□□□□ -1.36
SWSAP1-201ENST00000312423 MDN1Q9NU22 5596 aa6.56□□□□□ -1.36
SWSAP1-201ENST00000312423 NEBP20929 6669 aa6.55□□□□□ -1.36
SWSAP1-201ENST00000312423 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
SWSAP1-201ENST00000312423 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
SWSAP1-201ENST00000312423 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
SWSAP1-201ENST00000312423 MT1EP04732 61 aa6.47□□□□□ -1.37
SWSAP1-201ENST00000312423 SPRR2DP22532 72 aa6.43□□□□□ -1.38
SWSAP1-201ENST00000312423 KRTAP20-1Q3LI63 56 aa6.43□□□□□ -1.38
SWSAP1-201ENST00000312423 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
SWSAP1-201ENST00000312423 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
SWSAP1-201ENST00000312423 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
SWSAP1-201ENST00000312423 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
SWSAP1-201ENST00000312423 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
SWSAP1-201ENST00000312423 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
SWSAP1-201ENST00000312423 MT1LQ93083 61 aa6.24□□□□□ -1.41
SWSAP1-201ENST00000312423 MT1GP13640 62 aa6.23□□□□□ -1.41
SWSAP1-201ENST00000312423 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
SWSAP1-201ENST00000312423 KRTAP2-2Q9BYT5 123 aa6.16□□□□□ -1.42
SWSAP1-201ENST00000312423 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
SWSAP1-201ENST00000312423 MT1MQ8N339 61 aa6.14□□□□□ -1.43
SWSAP1-201ENST00000312423 INE1O15225 51 aa6.03□□□□□ -1.44
SWSAP1-201ENST00000312423 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
SWSAP1-201ENST00000312423 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
SWSAP1-201ENST00000312423 KRTAP4-12Q9BQ66 201 aa5.94□□□□□ -1.46
SWSAP1-201ENST00000312423 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
SWSAP1-201ENST00000312423 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
SWSAP1-201ENST00000312423 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
SWSAP1-201ENST00000312423 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
SWSAP1-201ENST00000312423 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
SWSAP1-201ENST00000312423 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
SWSAP1-201ENST00000312423 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
SWSAP1-201ENST00000312423 MT4P47944 62 aa5.61□□□□□ -1.51
SWSAP1-201ENST00000312423 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
SWSAP1-201ENST00000312423 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
SWSAP1-201ENST00000312423 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
SWSAP1-201ENST00000312423 KRTAP9-6A8MVA2 160 aa5.47□□□□□ -1.53
SWSAP1-201ENST00000312423 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
SWSAP1-201ENST00000312423 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
SWSAP1-201ENST00000312423 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
SWSAP1-201ENST00000312423 MT1AP04731 61 aa5.31□□□□□ -1.56
SWSAP1-201ENST00000312423 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
SWSAP1-201ENST00000312423 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
SWSAP1-201ENST00000312423 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
SWSAP1-201ENST00000312423 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
SWSAP1-201ENST00000312423 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
SWSAP1-201ENST00000312423 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
SWSAP1-201ENST00000312423 GPR98Q8WXG9 6306 aa5□□□□□ -1.61
SWSAP1-201ENST00000312423 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
SWSAP1-201ENST00000312423 KRTAP5-10Q6L8G5 202 aa4.98□□□□□ -1.61
SWSAP1-201ENST00000312423 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
SWSAP1-201ENST00000312423 MT3P25713 68 aa4.86□□□□□ -1.63
SWSAP1-201ENST00000312423 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
SWSAP1-201ENST00000312423 KRTAP5-8O75690 187 aa4.56□□□□□ -1.68
SWSAP1-201ENST00000312423 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
SWSAP1-201ENST00000312423 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
SWSAP1-201ENST00000312423 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
SWSAP1-201ENST00000312423 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
SWSAP1-201ENST00000312423 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
SWSAP1-201ENST00000312423 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
SWSAP1-201ENST00000312423 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
SWSAP1-201ENST00000312423 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
SWSAP1-201ENST00000312423 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
SWSAP1-201ENST00000312423 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
SWSAP1-201ENST00000312423 PRM1P04553 51 aa3.98□□□□□ -1.77
SWSAP1-201ENST00000312423 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
SWSAP1-201ENST00000312423 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
SWSAP1-201ENST00000312423 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
SWSAP1-201ENST00000312423 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
SWSAP1-201ENST00000312423 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
SWSAP1-201ENST00000312423 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
SWSAP1-201ENST00000312423 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
SWSAP1-201ENST00000312423 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
SWSAP1-201ENST00000312423 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 71.1 ms