RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
RBFOX1-201ENST00000311745 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
RBFOX1-201ENST00000311745 LCE3BQ5TA77 95 aa3.28□□□□□ -1.88
RBFOX1-201ENST00000311745 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
RBFOX1-201ENST00000311745 MT1EP04732 61 aa3.27□□□□□ -1.89
RBFOX1-201ENST00000311745 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
RBFOX1-201ENST00000311745 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
RBFOX1-201ENST00000311745 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
RBFOX1-201ENST00000311745 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
RBFOX1-201ENST00000311745 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
RBFOX1-201ENST00000311745 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
RBFOX1-201ENST00000311745 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
RBFOX1-201ENST00000311745 MT1LQ93083 61 aa3.25□□□□□ -1.89
RBFOX1-201ENST00000311745 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
RBFOX1-201ENST00000311745 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
RBFOX1-201ENST00000311745 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
RBFOX1-201ENST00000311745 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
RBFOX1-201ENST00000311745 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
RBFOX1-201ENST00000311745 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
RBFOX1-201ENST00000311745 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
RBFOX1-201ENST00000311745 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
RBFOX1-201ENST00000311745 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
RBFOX1-201ENST00000311745 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
RBFOX1-201ENST00000311745 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
RBFOX1-201ENST00000311745 MACF1Q9UPN3 7388 aaKnown RBP3.06□□□□□ -1.92
RBFOX1-201ENST00000311745 MT1MQ8N339 61 aa3.05□□□□□ -1.92
RBFOX1-201ENST00000311745 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
RBFOX1-201ENST00000311745 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
RBFOX1-201ENST00000311745 PRM1P04553 51 aa2.99□□□□□ -1.93
RBFOX1-201ENST00000311745 MT1GP13640 62 aa2.99□□□□□ -1.93
RBFOX1-201ENST00000311745 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
RBFOX1-201ENST00000311745 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.93
RBFOX1-201ENST00000311745 CRCT1Q9UGL9 99 aa2.96□□□□□ -1.94
RBFOX1-201ENST00000311745 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
RBFOX1-201ENST00000311745 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
RBFOX1-201ENST00000311745 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
RBFOX1-201ENST00000311745 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
RBFOX1-201ENST00000311745 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
RBFOX1-201ENST00000311745 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
RBFOX1-201ENST00000311745 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
RBFOX1-201ENST00000311745 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
RBFOX1-201ENST00000311745 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
RBFOX1-201ENST00000311745 MT3P25713 68 aa2.77□□□□□ -1.97
RBFOX1-201ENST00000311745 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
RBFOX1-201ENST00000311745 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
RBFOX1-201ENST00000311745 MT1AP04731 61 aa2.7□□□□□ -1.98
RBFOX1-201ENST00000311745 SPRR2EP22531 72 aa2.7□□□□□ -1.98
RBFOX1-201ENST00000311745 SPRR2BP35325 72 aa2.7□□□□□ -1.98
RBFOX1-201ENST00000311745 SPRR2AP35326 72 aa2.7□□□□□ -1.98
RBFOX1-201ENST00000311745 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
RBFOX1-201ENST00000311745 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
RBFOX1-201ENST00000311745 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
RBFOX1-201ENST00000311745 SPRR2DP22532 72 aa2.58□□□□□ -2
RBFOX1-201ENST00000311745 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
RBFOX1-201ENST00000311745 NEBP20929 6669 aa2.55□□□□□ -2
RBFOX1-201ENST00000311745 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
RBFOX1-201ENST00000311745 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
RBFOX1-201ENST00000311745 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
RBFOX1-201ENST00000311745 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
RBFOX1-201ENST00000311745 MT4P47944 62 aa2.27□□□□□ -2.05
RBFOX1-201ENST00000311745 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
RBFOX1-201ENST00000311745 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
RBFOX1-201ENST00000311745 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
RBFOX1-201ENST00000311745 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
RBFOX1-201ENST00000311745 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
RBFOX1-201ENST00000311745 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
RBFOX1-201ENST00000311745 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
RBFOX1-201ENST00000311745 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
RBFOX1-201ENST00000311745 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
RBFOX1-201ENST00000311745 KRTAP5-8O75690 187 aa1.9□□□□□ -2.1
RBFOX1-201ENST00000311745 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.1
RBFOX1-201ENST00000311745 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
RBFOX1-201ENST00000311745 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
RBFOX1-201ENST00000311745 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.13
RBFOX1-201ENST00000311745 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
RBFOX1-201ENST00000311745 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
RBFOX1-201ENST00000311745 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 71.4 ms