RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 LCE2DQ5TA82 110 aaPredicted RBP3.08□□□□□ -1.92
LCLAT1-201ENST00000309052 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
LCLAT1-201ENST00000309052 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
LCLAT1-201ENST00000309052 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
LCLAT1-201ENST00000309052 INE1O15225 51 aa3.02□□□□□ -1.93
LCLAT1-201ENST00000309052 MT1EP04732 61 aa3.02□□□□□ -1.93
LCLAT1-201ENST00000309052 MT1LQ93083 61 aa2.98□□□□□ -1.93
LCLAT1-201ENST00000309052 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
LCLAT1-201ENST00000309052 MT1GP13640 62 aa2.98□□□□□ -1.93
LCLAT1-201ENST00000309052 SPRR2EP22531 72 aa2.94□□□□□ -1.94
LCLAT1-201ENST00000309052 SPRR2BP35325 72 aa2.94□□□□□ -1.94
LCLAT1-201ENST00000309052 SPRR2AP35326 72 aa2.94□□□□□ -1.94
LCLAT1-201ENST00000309052 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
LCLAT1-201ENST00000309052 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
LCLAT1-201ENST00000309052 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.94
LCLAT1-201ENST00000309052 MT1MQ8N339 61 aa2.87□□□□□ -1.95
LCLAT1-201ENST00000309052 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
LCLAT1-201ENST00000309052 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
LCLAT1-201ENST00000309052 SPRR2DP22532 72 aa2.8□□□□□ -1.96
LCLAT1-201ENST00000309052 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
LCLAT1-201ENST00000309052 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
LCLAT1-201ENST00000309052 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
LCLAT1-201ENST00000309052 LCE3BQ5TA77 95 aa2.75□□□□□ -1.97
LCLAT1-201ENST00000309052 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
LCLAT1-201ENST00000309052 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
LCLAT1-201ENST00000309052 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
LCLAT1-201ENST00000309052 MT4P47944 62 aa2.62□□□□□ -1.99
LCLAT1-201ENST00000309052 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
LCLAT1-201ENST00000309052 NEBP20929 6669 aa2.59□□□□□ -1.99
LCLAT1-201ENST00000309052 KRTAP19-4Q3LI73 84 aa2.58□□□□□ -2
LCLAT1-201ENST00000309052 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
LCLAT1-201ENST00000309052 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
LCLAT1-201ENST00000309052 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
LCLAT1-201ENST00000309052 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
LCLAT1-201ENST00000309052 MT1AP04731 61 aa2.48□□□□□ -2.01
LCLAT1-201ENST00000309052 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
LCLAT1-201ENST00000309052 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
LCLAT1-201ENST00000309052 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
LCLAT1-201ENST00000309052 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
LCLAT1-201ENST00000309052 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
LCLAT1-201ENST00000309052 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
LCLAT1-201ENST00000309052 KRTAP9-4Q9BYQ2 154 aa2.35□□□□□ -2.03
LCLAT1-201ENST00000309052 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
LCLAT1-201ENST00000309052 LCE1DQ5T752 114 aa2.34□□□□□ -2.03
LCLAT1-201ENST00000309052 MT3P25713 68 aa2.33□□□□□ -2.04
LCLAT1-201ENST00000309052 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
LCLAT1-201ENST00000309052 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
LCLAT1-201ENST00000309052 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
LCLAT1-201ENST00000309052 LCE4AQ5TA78 99 aa2.22□□□□□ -2.05
LCLAT1-201ENST00000309052 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
LCLAT1-201ENST00000309052 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
LCLAT1-201ENST00000309052 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
LCLAT1-201ENST00000309052 PRM1P04553 51 aa2.15□□□□□ -2.07
LCLAT1-201ENST00000309052 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
LCLAT1-201ENST00000309052 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
LCLAT1-201ENST00000309052 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
LCLAT1-201ENST00000309052 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
LCLAT1-201ENST00000309052 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
LCLAT1-201ENST00000309052 KRTAP4-11Q9BYQ6 195 aa1.97□□□□□ -2.09
LCLAT1-201ENST00000309052 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
LCLAT1-201ENST00000309052 KRTAP9-9Q9BYP9 154 aa1.86□□□□□ -2.11
LCLAT1-201ENST00000309052 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
LCLAT1-201ENST00000309052 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
LCLAT1-201ENST00000309052 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
LCLAT1-201ENST00000309052 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
LCLAT1-201ENST00000309052 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
LCLAT1-201ENST00000309052 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
LCLAT1-201ENST00000309052 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
LCLAT1-201ENST00000309052 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
LCLAT1-201ENST00000309052 LCE1FQ5T754 118 aa1.65□□□□□ -2.15
LCLAT1-201ENST00000309052 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
LCLAT1-201ENST00000309052 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
LCLAT1-201ENST00000309052 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
LCLAT1-201ENST00000309052 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
LCLAT1-201ENST00000309052 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
LCLAT1-201ENST00000309052 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
LCLAT1-201ENST00000309052 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms