RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
CASP3-201ENST00000308394 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
CASP3-201ENST00000308394 CRCT1Q9UGL9 99 aa4.16□□□□□ -1.74
CASP3-201ENST00000308394 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
CASP3-201ENST00000308394 KMT2DO14686 5537 aa4.13□□□□□ -1.75
CASP3-201ENST00000308394 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
CASP3-201ENST00000308394 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
CASP3-201ENST00000308394 KRTAP12-3P60328 96 aa4□□□□□ -1.77
CASP3-201ENST00000308394 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
CASP3-201ENST00000308394 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
CASP3-201ENST00000308394 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
CASP3-201ENST00000308394 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
CASP3-201ENST00000308394 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
CASP3-201ENST00000308394 MT1EP04732 61 aa3.87□□□□□ -1.79
CASP3-201ENST00000308394 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
CASP3-201ENST00000308394 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
CASP3-201ENST00000308394 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
CASP3-201ENST00000308394 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
CASP3-201ENST00000308394 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
CASP3-201ENST00000308394 MT1LQ93083 61 aa3.78□□□□□ -1.8
CASP3-201ENST00000308394 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
CASP3-201ENST00000308394 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
CASP3-201ENST00000308394 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
CASP3-201ENST00000308394 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
CASP3-201ENST00000308394 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
CASP3-201ENST00000308394 MT1GP13640 62 aa3.69□□□□□ -1.82
CASP3-201ENST00000308394 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
CASP3-201ENST00000308394 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
CASP3-201ENST00000308394 SPRR2EP22531 72 aa3.67□□□□□ -1.82
CASP3-201ENST00000308394 SPRR2BP35325 72 aa3.67□□□□□ -1.82
CASP3-201ENST00000308394 SPRR2AP35326 72 aa3.67□□□□□ -1.82
CASP3-201ENST00000308394 MT1MQ8N339 61 aa3.65□□□□□ -1.83
CASP3-201ENST00000308394 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
CASP3-201ENST00000308394 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
CASP3-201ENST00000308394 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
CASP3-201ENST00000308394 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
CASP3-201ENST00000308394 SPRR2DP22532 72 aa3.53□□□□□ -1.84
CASP3-201ENST00000308394 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
CASP3-201ENST00000308394 NEBP20929 6669 aa3.46□□□□□ -1.86
CASP3-201ENST00000308394 KRTAP2-3P0C7H8 128 aa3.35□□□□□ -1.87
CASP3-201ENST00000308394 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
CASP3-201ENST00000308394 KRTAP2-4Q9BYR9 128 aa3.35□□□□□ -1.87
CASP3-201ENST00000308394 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
CASP3-201ENST00000308394 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
CASP3-201ENST00000308394 MT3P25713 68 aa3.27□□□□□ -1.89
CASP3-201ENST00000308394 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
CASP3-201ENST00000308394 MT1AP04731 61 aa3.21□□□□□ -1.9
CASP3-201ENST00000308394 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
CASP3-201ENST00000308394 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
CASP3-201ENST00000308394 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
CASP3-201ENST00000308394 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
CASP3-201ENST00000308394 MT4P47944 62 aa3.09□□□□□ -1.91
CASP3-201ENST00000308394 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
CASP3-201ENST00000308394 PRM1P04553 51 aa3.03□□□□□ -1.92
CASP3-201ENST00000308394 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.93
CASP3-201ENST00000308394 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
CASP3-201ENST00000308394 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
CASP3-201ENST00000308394 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
CASP3-201ENST00000308394 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
CASP3-201ENST00000308394 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
CASP3-201ENST00000308394 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
CASP3-201ENST00000308394 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
CASP3-201ENST00000308394 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
CASP3-201ENST00000308394 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
CASP3-201ENST00000308394 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
CASP3-201ENST00000308394 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2.01
CASP3-201ENST00000308394 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
CASP3-201ENST00000308394 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
CASP3-201ENST00000308394 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CASP3-201ENST00000308394 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CASP3-201ENST00000308394 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
CASP3-201ENST00000308394 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CASP3-201ENST00000308394 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
CASP3-201ENST00000308394 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CASP3-201ENST00000308394 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
CASP3-201ENST00000308394 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
CASP3-201ENST00000308394 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 102.4 ms