RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
FOXP4-201ENST00000307972 MT1LQ93083 61 aa3.98□□□□□ -1.77
FOXP4-201ENST00000307972 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
FOXP4-201ENST00000307972 MT1EP04732 61 aa3.94□□□□□ -1.78
FOXP4-201ENST00000307972 FCGBPQ9Y6R7 5405 aaPredicted RBP3.92□□□□□ -1.78
FOXP4-201ENST00000307972 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
FOXP4-201ENST00000307972 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
FOXP4-201ENST00000307972 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
FOXP4-201ENST00000307972 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
FOXP4-201ENST00000307972 MT1GP13640 62 aa3.82□□□□□ -1.8
FOXP4-201ENST00000307972 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
FOXP4-201ENST00000307972 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
FOXP4-201ENST00000307972 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
FOXP4-201ENST00000307972 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
FOXP4-201ENST00000307972 MT1MQ8N339 61 aa3.69□□□□□ -1.82
FOXP4-201ENST00000307972 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
FOXP4-201ENST00000307972 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
FOXP4-201ENST00000307972 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
FOXP4-201ENST00000307972 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.83
FOXP4-201ENST00000307972 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
FOXP4-201ENST00000307972 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
FOXP4-201ENST00000307972 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.85
FOXP4-201ENST00000307972 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
FOXP4-201ENST00000307972 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
FOXP4-201ENST00000307972 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
FOXP4-201ENST00000307972 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
FOXP4-201ENST00000307972 NEBP20929 6669 aa3.41□□□□□ -1.86
FOXP4-201ENST00000307972 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
FOXP4-201ENST00000307972 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
FOXP4-201ENST00000307972 MT1AP04731 61 aa3.38□□□□□ -1.87
FOXP4-201ENST00000307972 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
FOXP4-201ENST00000307972 PRM1P04553 51 aa3.32□□□□□ -1.88
FOXP4-201ENST00000307972 SPRR2EP22531 72 aa3.26□□□□□ -1.89
FOXP4-201ENST00000307972 SPRR2BP35325 72 aa3.26□□□□□ -1.89
FOXP4-201ENST00000307972 SPRR2AP35326 72 aa3.26□□□□□ -1.89
FOXP4-201ENST00000307972 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
FOXP4-201ENST00000307972 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
FOXP4-201ENST00000307972 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
FOXP4-201ENST00000307972 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
FOXP4-201ENST00000307972 SPRR2DP22532 72 aa3.14□□□□□ -1.91
FOXP4-201ENST00000307972 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
FOXP4-201ENST00000307972 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
FOXP4-201ENST00000307972 MT3P25713 68 aa3.04□□□□□ -1.92
FOXP4-201ENST00000307972 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
FOXP4-201ENST00000307972 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
FOXP4-201ENST00000307972 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
FOXP4-201ENST00000307972 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
FOXP4-201ENST00000307972 MT4P47944 62 aa2.81□□□□□ -1.96
FOXP4-201ENST00000307972 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
FOXP4-201ENST00000307972 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
FOXP4-201ENST00000307972 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
FOXP4-201ENST00000307972 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
FOXP4-201ENST00000307972 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
FOXP4-201ENST00000307972 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
FOXP4-201ENST00000307972 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
FOXP4-201ENST00000307972 MUC5ACP98088 5654 aa2.54□□□□□ -2
FOXP4-201ENST00000307972 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
FOXP4-201ENST00000307972 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
FOXP4-201ENST00000307972 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
FOXP4-201ENST00000307972 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
FOXP4-201ENST00000307972 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
FOXP4-201ENST00000307972 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
FOXP4-201ENST00000307972 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
FOXP4-201ENST00000307972 KRTAP5-8O75690 187 aa2.28□□□□□ -2.05
FOXP4-201ENST00000307972 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
FOXP4-201ENST00000307972 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
FOXP4-201ENST00000307972 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
FOXP4-201ENST00000307972 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
FOXP4-201ENST00000307972 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
FOXP4-201ENST00000307972 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
FOXP4-201ENST00000307972 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
FOXP4-201ENST00000307972 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
FOXP4-201ENST00000307972 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
FOXP4-201ENST00000307972 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
FOXP4-201ENST00000307972 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
FOXP4-201ENST00000307972 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
FOXP4-201ENST00000307972 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 37.1 ms