RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
FANCA-201ENST00000305699 LINC01558Q9Y6Z2 57 aa5.46□□□□□ -1.54
FANCA-201ENST00000305699 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
FANCA-201ENST00000305699 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
FANCA-201ENST00000305699 MT4P47944 62 aa5.41□□□□□ -1.54
FANCA-201ENST00000305699 UQCR11O14957 56 aa5.38□□□□□ -1.55
FANCA-201ENST00000305699 TMEM258P61165 79 aa5.35□□□□□ -1.55
FANCA-201ENST00000305699 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
FANCA-201ENST00000305699 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
FANCA-201ENST00000305699 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
FANCA-201ENST00000305699 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
FANCA-201ENST00000305699 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
FANCA-201ENST00000305699 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
FANCA-201ENST00000305699 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
FANCA-201ENST00000305699 K7ERS5 55 aa5.19□□□□□ -1.58
FANCA-201ENST00000305699 PSPHP1O15172 72 aa5.12□□□□□ -1.59
FANCA-201ENST00000305699 V9GYY9 64 aa5.1□□□□□ -1.59
FANCA-201ENST00000305699 H3BS24 57 aa5.08□□□□□ -1.6
FANCA-201ENST00000305699 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
FANCA-201ENST00000305699 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
FANCA-201ENST00000305699 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
FANCA-201ENST00000305699 Q1T7F1 81 aa5.03□□□□□ -1.6
FANCA-201ENST00000305699 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
FANCA-201ENST00000305699 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
FANCA-201ENST00000305699 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
FANCA-201ENST00000305699 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
FANCA-201ENST00000305699 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
FANCA-201ENST00000305699 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
FANCA-201ENST00000305699 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
FANCA-201ENST00000305699 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
FANCA-201ENST00000305699 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
FANCA-201ENST00000305699 A6NED7 52 aa4.95□□□□□ -1.62
FANCA-201ENST00000305699 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.62
FANCA-201ENST00000305699 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
FANCA-201ENST00000305699 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
FANCA-201ENST00000305699 ROMO1P60602 79 aa4.8□□□□□ -1.64
FANCA-201ENST00000305699 MT1AP04731 61 aa4.72□□□□□ -1.65
FANCA-201ENST00000305699 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
FANCA-201ENST00000305699 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
FANCA-201ENST00000305699 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
FANCA-201ENST00000305699 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
FANCA-201ENST00000305699 KRTAP4-11Q9BYQ6 195 aa4.61□□□□□ -1.67
FANCA-201ENST00000305699 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
FANCA-201ENST00000305699 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
FANCA-201ENST00000305699 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
FANCA-201ENST00000305699 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
FANCA-201ENST00000305699 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
FANCA-201ENST00000305699 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
FANCA-201ENST00000305699 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
FANCA-201ENST00000305699 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
FANCA-201ENST00000305699 MT3P25713 68 aa4.33□□□□□ -1.72
FANCA-201ENST00000305699 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
FANCA-201ENST00000305699 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
FANCA-201ENST00000305699 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
FANCA-201ENST00000305699 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
FANCA-201ENST00000305699 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
FANCA-201ENST00000305699 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
FANCA-201ENST00000305699 LCE1EQ5T753 118 aa3.96□□□□□ -1.77
FANCA-201ENST00000305699 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
FANCA-201ENST00000305699 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
FANCA-201ENST00000305699 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
FANCA-201ENST00000305699 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
FANCA-201ENST00000305699 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
FANCA-201ENST00000305699 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
FANCA-201ENST00000305699 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
FANCA-201ENST00000305699 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
FANCA-201ENST00000305699 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
FANCA-201ENST00000305699 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
FANCA-201ENST00000305699 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
FANCA-201ENST00000305699 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
FANCA-201ENST00000305699 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.92
FANCA-201ENST00000305699 PHGR1C9JFL3 82 aa3□□□□□ -1.93
FANCA-201ENST00000305699 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
FANCA-201ENST00000305699 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
FANCA-201ENST00000305699 INE1O15225 51 aa2.68□□□□□ -1.98
FANCA-201ENST00000305699 PRM1P04553 51 aa2.45□□□□□ -2.02
FANCA-201ENST00000305699 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
FANCA-201ENST00000305699 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 85.8 ms