RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
CCDC7-202ENST00000302316 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
CCDC7-202ENST00000302316 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
CCDC7-202ENST00000302316 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
CCDC7-202ENST00000302316 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.64
CCDC7-202ENST00000302316 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
CCDC7-202ENST00000302316 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
CCDC7-202ENST00000302316 MT1EP04732 61 aa4.73□□□□□ -1.65
CCDC7-202ENST00000302316 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
CCDC7-202ENST00000302316 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
CCDC7-202ENST00000302316 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
CCDC7-202ENST00000302316 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
CCDC7-202ENST00000302316 MT1LQ93083 61 aa4.63□□□□□ -1.67
CCDC7-202ENST00000302316 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
CCDC7-202ENST00000302316 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
CCDC7-202ENST00000302316 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
CCDC7-202ENST00000302316 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
CCDC7-202ENST00000302316 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
CCDC7-202ENST00000302316 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
CCDC7-202ENST00000302316 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
CCDC7-202ENST00000302316 MT1GP13640 62 aa4.49□□□□□ -1.69
CCDC7-202ENST00000302316 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.69
CCDC7-202ENST00000302316 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
CCDC7-202ENST00000302316 MT1MQ8N339 61 aa4.45□□□□□ -1.7
CCDC7-202ENST00000302316 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
CCDC7-202ENST00000302316 SPRR2EP22531 72 aa4.45□□□□□ -1.7
CCDC7-202ENST00000302316 SPRR2BP35325 72 aa4.45□□□□□ -1.7
CCDC7-202ENST00000302316 SPRR2AP35326 72 aa4.45□□□□□ -1.7
CCDC7-202ENST00000302316 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
CCDC7-202ENST00000302316 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
CCDC7-202ENST00000302316 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
CCDC7-202ENST00000302316 SPRR2DP22532 72 aa4.28□□□□□ -1.72
CCDC7-202ENST00000302316 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
CCDC7-202ENST00000302316 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
CCDC7-202ENST00000302316 NEBP20929 6669 aa4.18□□□□□ -1.74
CCDC7-202ENST00000302316 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
CCDC7-202ENST00000302316 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
CCDC7-202ENST00000302316 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
CCDC7-202ENST00000302316 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
CCDC7-202ENST00000302316 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
CCDC7-202ENST00000302316 MT1AP04731 61 aa3.93□□□□□ -1.78
CCDC7-202ENST00000302316 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
CCDC7-202ENST00000302316 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
CCDC7-202ENST00000302316 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
CCDC7-202ENST00000302316 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
CCDC7-202ENST00000302316 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
CCDC7-202ENST00000302316 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
CCDC7-202ENST00000302316 MT4P47944 62 aa3.73□□□□□ -1.81
CCDC7-202ENST00000302316 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.81
CCDC7-202ENST00000302316 MT3P25713 68 aa3.7□□□□□ -1.82
CCDC7-202ENST00000302316 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
CCDC7-202ENST00000302316 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
CCDC7-202ENST00000302316 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
CCDC7-202ENST00000302316 INE1O15225 51 aa3.52□□□□□ -1.85
CCDC7-202ENST00000302316 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
CCDC7-202ENST00000302316 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
CCDC7-202ENST00000302316 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CCDC7-202ENST00000302316 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
CCDC7-202ENST00000302316 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
CCDC7-202ENST00000302316 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
CCDC7-202ENST00000302316 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
CCDC7-202ENST00000302316 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
CCDC7-202ENST00000302316 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
CCDC7-202ENST00000302316 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
CCDC7-202ENST00000302316 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.93
CCDC7-202ENST00000302316 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
CCDC7-202ENST00000302316 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
CCDC7-202ENST00000302316 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
CCDC7-202ENST00000302316 PRM1P04553 51 aa2.89□□□□□ -1.95
CCDC7-202ENST00000302316 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
CCDC7-202ENST00000302316 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
CCDC7-202ENST00000302316 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CCDC7-202ENST00000302316 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
CCDC7-202ENST00000302316 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
CCDC7-202ENST00000302316 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CCDC7-202ENST00000302316 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
CCDC7-202ENST00000302316 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
CCDC7-202ENST00000302316 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms