RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
HERPUD1-201ENST00000300302 KRTAP5-9P26371 169 aa5.54□□□□□ -1.52
HERPUD1-201ENST00000300302 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
HERPUD1-201ENST00000300302 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
HERPUD1-201ENST00000300302 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
HERPUD1-201ENST00000300302 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
HERPUD1-201ENST00000300302 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
HERPUD1-201ENST00000300302 MT1GP13640 62 aa5.43□□□□□ -1.54
HERPUD1-201ENST00000300302 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
HERPUD1-201ENST00000300302 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
HERPUD1-201ENST00000300302 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
HERPUD1-201ENST00000300302 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
HERPUD1-201ENST00000300302 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
HERPUD1-201ENST00000300302 MT1MQ8N339 61 aa5.35□□□□□ -1.55
HERPUD1-201ENST00000300302 SPRR2EP22531 72 aa5.34□□□□□ -1.55
HERPUD1-201ENST00000300302 SPRR2BP35325 72 aa5.34□□□□□ -1.55
HERPUD1-201ENST00000300302 SPRR2AP35326 72 aa5.34□□□□□ -1.55
HERPUD1-201ENST00000300302 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
HERPUD1-201ENST00000300302 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
HERPUD1-201ENST00000300302 NEBP20929 6669 aa5.17□□□□□ -1.58
HERPUD1-201ENST00000300302 SPRR2DP22532 72 aa5.15□□□□□ -1.59
HERPUD1-201ENST00000300302 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
HERPUD1-201ENST00000300302 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-201ENST00000300302 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
HERPUD1-201ENST00000300302 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
HERPUD1-201ENST00000300302 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
HERPUD1-201ENST00000300302 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
HERPUD1-201ENST00000300302 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
HERPUD1-201ENST00000300302 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-201ENST00000300302 MT1AP04731 61 aa4.75□□□□□ -1.65
HERPUD1-201ENST00000300302 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
HERPUD1-201ENST00000300302 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
HERPUD1-201ENST00000300302 INE1O15225 51 aa4.61□□□□□ -1.67
HERPUD1-201ENST00000300302 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
HERPUD1-201ENST00000300302 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
HERPUD1-201ENST00000300302 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.69
HERPUD1-201ENST00000300302 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
HERPUD1-201ENST00000300302 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
HERPUD1-201ENST00000300302 MT4P47944 62 aa4.5□□□□□ -1.69
HERPUD1-201ENST00000300302 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
HERPUD1-201ENST00000300302 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
HERPUD1-201ENST00000300302 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
HERPUD1-201ENST00000300302 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
HERPUD1-201ENST00000300302 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
HERPUD1-201ENST00000300302 MT3P25713 68 aa4.32□□□□□ -1.72
HERPUD1-201ENST00000300302 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
HERPUD1-201ENST00000300302 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
HERPUD1-201ENST00000300302 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
HERPUD1-201ENST00000300302 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
HERPUD1-201ENST00000300302 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.76
HERPUD1-201ENST00000300302 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
HERPUD1-201ENST00000300302 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
HERPUD1-201ENST00000300302 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
HERPUD1-201ENST00000300302 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
HERPUD1-201ENST00000300302 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
HERPUD1-201ENST00000300302 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
HERPUD1-201ENST00000300302 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
HERPUD1-201ENST00000300302 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
HERPUD1-201ENST00000300302 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
HERPUD1-201ENST00000300302 PRM1P04553 51 aa3.62□□□□□ -1.83
HERPUD1-201ENST00000300302 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
HERPUD1-201ENST00000300302 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
HERPUD1-201ENST00000300302 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
HERPUD1-201ENST00000300302 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
HERPUD1-201ENST00000300302 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
HERPUD1-201ENST00000300302 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
HERPUD1-201ENST00000300302 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-201ENST00000300302 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
HERPUD1-201ENST00000300302 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
HERPUD1-201ENST00000300302 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
HERPUD1-201ENST00000300302 LCE1FQ5T754 118 aa3.03□□□□□ -1.93
HERPUD1-201ENST00000300302 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-201ENST00000300302 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
HERPUD1-201ENST00000300302 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
HERPUD1-201ENST00000300302 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
HERPUD1-201ENST00000300302 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
HERPUD1-201ENST00000300302 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms