RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 SPRR2AP35326 72 aa6.63□□□□□ -1.35
TMED3-201ENST00000299705 LCE1AQ5T7P2 110 aa6.61□□□□□ -1.35
TMED3-201ENST00000299705 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
TMED3-201ENST00000299705 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
TMED3-201ENST00000299705 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
TMED3-201ENST00000299705 KRTAP19-3Q7Z4W3 81 aa6.48□□□□□ -1.37
TMED3-201ENST00000299705 KRTAP2-3P0C7H8 128 aa6.47□□□□□ -1.37
TMED3-201ENST00000299705 KRTAP2-4Q9BYR9 128 aa6.47□□□□□ -1.37
TMED3-201ENST00000299705 LCE5AQ5TCM9 118 aa6.44□□□□□ -1.38
TMED3-201ENST00000299705 MT1LQ93083 61 aa6.44□□□□□ -1.38
TMED3-201ENST00000299705 SPRR2DP22532 72 aa6.41□□□□□ -1.38
TMED3-201ENST00000299705 MT1GP13640 62 aa6.41□□□□□ -1.38
TMED3-201ENST00000299705 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
TMED3-201ENST00000299705 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
TMED3-201ENST00000299705 MT1MQ8N339 61 aa6.28□□□□□ -1.4
TMED3-201ENST00000299705 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
TMED3-201ENST00000299705 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
TMED3-201ENST00000299705 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
TMED3-201ENST00000299705 H3BS24 57 aa6.18□□□□□ -1.42
TMED3-201ENST00000299705 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
TMED3-201ENST00000299705 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.44
TMED3-201ENST00000299705 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.44
TMED3-201ENST00000299705 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
TMED3-201ENST00000299705 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
TMED3-201ENST00000299705 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
TMED3-201ENST00000299705 KRTAP5-5Q701N2 237 aaPredicted RBP5.72□□□□□ -1.49
TMED3-201ENST00000299705 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.49
TMED3-201ENST00000299705 LCE4AQ5TA78 99 aa5.71□□□□□ -1.49
TMED3-201ENST00000299705 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.5
TMED3-201ENST00000299705 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
TMED3-201ENST00000299705 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
TMED3-201ENST00000299705 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
TMED3-201ENST00000299705 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
TMED3-201ENST00000299705 MT4P47944 62 aa5.57□□□□□ -1.52
TMED3-201ENST00000299705 MT1AP04731 61 aa5.49□□□□□ -1.53
TMED3-201ENST00000299705 HMCN1Q96RW7 5635 aa5.47□□□□□ -1.53
TMED3-201ENST00000299705 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
TMED3-201ENST00000299705 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
TMED3-201ENST00000299705 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
TMED3-201ENST00000299705 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
TMED3-201ENST00000299705 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
TMED3-201ENST00000299705 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
TMED3-201ENST00000299705 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
TMED3-201ENST00000299705 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
TMED3-201ENST00000299705 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
TMED3-201ENST00000299705 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
TMED3-201ENST00000299705 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
TMED3-201ENST00000299705 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
TMED3-201ENST00000299705 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
TMED3-201ENST00000299705 MT3P25713 68 aa5□□□□□ -1.61
TMED3-201ENST00000299705 INE1O15225 51 aa4.97□□□□□ -1.61
TMED3-201ENST00000299705 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
TMED3-201ENST00000299705 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
TMED3-201ENST00000299705 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
TMED3-201ENST00000299705 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
TMED3-201ENST00000299705 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
TMED3-201ENST00000299705 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
TMED3-201ENST00000299705 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
TMED3-201ENST00000299705 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
TMED3-201ENST00000299705 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
TMED3-201ENST00000299705 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
TMED3-201ENST00000299705 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
TMED3-201ENST00000299705 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
TMED3-201ENST00000299705 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
TMED3-201ENST00000299705 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
TMED3-201ENST00000299705 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
TMED3-201ENST00000299705 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
TMED3-201ENST00000299705 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
TMED3-201ENST00000299705 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
TMED3-201ENST00000299705 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
TMED3-201ENST00000299705 PRM1P04553 51 aa3.52□□□□□ -1.85
TMED3-201ENST00000299705 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
TMED3-201ENST00000299705 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
TMED3-201ENST00000299705 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
TMED3-201ENST00000299705 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
TMED3-201ENST00000299705 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
TMED3-201ENST00000299705 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 99.2 ms