RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
SEC61A2-201ENST00000298428 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
SEC61A2-201ENST00000298428 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
SEC61A2-201ENST00000298428 MT1GP13640 62 aa6.42□□□□□ -1.38
SEC61A2-201ENST00000298428 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
SEC61A2-201ENST00000298428 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
SEC61A2-201ENST00000298428 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
SEC61A2-201ENST00000298428 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
SEC61A2-201ENST00000298428 MT1MQ8N339 61 aa6.35□□□□□ -1.39
SEC61A2-201ENST00000298428 SPRR2EP22531 72 aa6.34□□□□□ -1.39
SEC61A2-201ENST00000298428 SPRR2BP35325 72 aa6.34□□□□□ -1.39
SEC61A2-201ENST00000298428 SPRR2AP35326 72 aa6.34□□□□□ -1.39
SEC61A2-201ENST00000298428 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
SEC61A2-201ENST00000298428 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
SEC61A2-201ENST00000298428 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
SEC61A2-201ENST00000298428 NEBP20929 6669 aa6.15□□□□□ -1.43
SEC61A2-201ENST00000298428 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
SEC61A2-201ENST00000298428 SPRR2DP22532 72 aa6.11□□□□□ -1.43
SEC61A2-201ENST00000298428 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
SEC61A2-201ENST00000298428 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
SEC61A2-201ENST00000298428 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
SEC61A2-201ENST00000298428 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
SEC61A2-201ENST00000298428 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
SEC61A2-201ENST00000298428 KRTAP5-5Q701N2 237 aaPredicted RBP5.73□□□□□ -1.49
SEC61A2-201ENST00000298428 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
SEC61A2-201ENST00000298428 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
SEC61A2-201ENST00000298428 KRTAP20-1Q3LI63 56 aa5.62□□□□□ -1.51
SEC61A2-201ENST00000298428 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
SEC61A2-201ENST00000298428 MT1AP04731 61 aa5.6□□□□□ -1.51
SEC61A2-201ENST00000298428 KRTAP2-2Q9BYT5 123 aa5.58□□□□□ -1.52
SEC61A2-201ENST00000298428 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
SEC61A2-201ENST00000298428 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
SEC61A2-201ENST00000298428 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
SEC61A2-201ENST00000298428 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
SEC61A2-201ENST00000298428 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
SEC61A2-201ENST00000298428 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
SEC61A2-201ENST00000298428 H3BS24 57 aa5.31□□□□□ -1.56
SEC61A2-201ENST00000298428 MT4P47944 62 aa5.31□□□□□ -1.56
SEC61A2-201ENST00000298428 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
SEC61A2-201ENST00000298428 A0A0A0MQY5 61 aa5.22□□□□□ -1.57
SEC61A2-201ENST00000298428 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
SEC61A2-201ENST00000298428 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
SEC61A2-201ENST00000298428 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
SEC61A2-201ENST00000298428 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
SEC61A2-201ENST00000298428 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
SEC61A2-201ENST00000298428 MT3P25713 68 aa5.08□□□□□ -1.6
SEC61A2-201ENST00000298428 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
SEC61A2-201ENST00000298428 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
SEC61A2-201ENST00000298428 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
SEC61A2-201ENST00000298428 INE1O15225 51 aa4.91□□□□□ -1.62
SEC61A2-201ENST00000298428 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
SEC61A2-201ENST00000298428 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
SEC61A2-201ENST00000298428 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
SEC61A2-201ENST00000298428 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
SEC61A2-201ENST00000298428 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
SEC61A2-201ENST00000298428 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SEC61A2-201ENST00000298428 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
SEC61A2-201ENST00000298428 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
SEC61A2-201ENST00000298428 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
SEC61A2-201ENST00000298428 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
SEC61A2-201ENST00000298428 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
SEC61A2-201ENST00000298428 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
SEC61A2-201ENST00000298428 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
SEC61A2-201ENST00000298428 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
SEC61A2-201ENST00000298428 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
SEC61A2-201ENST00000298428 PRM1P04553 51 aa4.09□□□□□ -1.76
SEC61A2-201ENST00000298428 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
SEC61A2-201ENST00000298428 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
SEC61A2-201ENST00000298428 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
SEC61A2-201ENST00000298428 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
SEC61A2-201ENST00000298428 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
SEC61A2-201ENST00000298428 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
SEC61A2-201ENST00000298428 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
SEC61A2-201ENST00000298428 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
SEC61A2-201ENST00000298428 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
SEC61A2-201ENST00000298428 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SEC61A2-201ENST00000298428 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 123.4 ms