RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 MT1LQ93083 61 aa8.79□□□□□ -1
GTF2A1-201ENST00000298173 KRTAP19-3Q7Z4W3 81 aa8.7□□□□□ -1.02
GTF2A1-201ENST00000298173 KRTAP19-4Q3LI73 84 aa8.65□□□□□ -1.03
GTF2A1-201ENST00000298173 LCE1AQ5T7P2 110 aa8.65□□□□□ -1.03
GTF2A1-201ENST00000298173 MDN1Q9NU22 5596 aa8.62□□□□□ -1.03
GTF2A1-201ENST00000298173 MT1GP13640 62 aa8.62□□□□□ -1.03
GTF2A1-201ENST00000298173 LCE5AQ5TCM9 118 aa8.61□□□□□ -1.03
GTF2A1-201ENST00000298173 SPRR2EP22531 72 aa8.56□□□□□ -1.04
GTF2A1-201ENST00000298173 SPRR2BP35325 72 aa8.56□□□□□ -1.04
GTF2A1-201ENST00000298173 SPRR2AP35326 72 aa8.56□□□□□ -1.04
GTF2A1-201ENST00000298173 LCE3CQ5T5A8 94 aa8.54□□□□□ -1.04
GTF2A1-201ENST00000298173 MT1MQ8N339 61 aa8.49□□□□□ -1.05
GTF2A1-201ENST00000298173 KRTAP4-7Q9BYR0 210 aa8.47□□□□□ -1.05
GTF2A1-201ENST00000298173 NEBP20929 6669 aa8.37□□□□□ -1.07
GTF2A1-201ENST00000298173 SPRR5A0A1B0GTR4 108 aa8.33□□□□□ -1.08
GTF2A1-201ENST00000298173 KRTAP4-3Q9BYR4 195 aa8.31□□□□□ -1.08
GTF2A1-201ENST00000298173 SPRR2DP22532 72 aa8.24□□□□□ -1.09
GTF2A1-201ENST00000298173 DSTQ03001 7570 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-201ENST00000298173 KRTAP9-6A8MVA2 160 aa8.1□□□□□ -1.11
GTF2A1-201ENST00000298173 LOC100996750A0A140TA64 210 aa7.97□□□□□ -1.13
GTF2A1-201ENST00000298173 LCE3BQ5TA77 95 aa7.96□□□□□ -1.13
GTF2A1-201ENST00000298173 KRTAP2-3P0C7H8 128 aa7.85□□□□□ -1.15
GTF2A1-201ENST00000298173 KRTAP2-4Q9BYR9 128 aa7.85□□□□□ -1.15
GTF2A1-201ENST00000298173 LUZP6Q538Z0 58 aa7.8□□□□□ -1.16
GTF2A1-201ENST00000298173 KRTAP20-1Q3LI63 56 aa7.73□□□□□ -1.17
GTF2A1-201ENST00000298173 KRTAP5-5Q701N2 237 aaPredicted RBP7.72□□□□□ -1.17
GTF2A1-201ENST00000298173 KRTAP2-2Q9BYT5 123 aa7.67□□□□□ -1.18
GTF2A1-201ENST00000298173 KRTAP2-1Q9BYU5 128 aa7.67□□□□□ -1.18
GTF2A1-201ENST00000298173 KRTAP5-4Q6L8H1 288 aa7.49□□□□□ -1.21
GTF2A1-201ENST00000298173 MT1AP04731 61 aa7.47□□□□□ -1.21
GTF2A1-201ENST00000298173 NDUFAF8A1L188 74 aa7.46□□□□□ -1.22
GTF2A1-201ENST00000298173 KRTAP6-1Q3LI64 71 aa7.41□□□□□ -1.22
GTF2A1-201ENST00000298173 LCE4AQ5TA78 99 aa7.36□□□□□ -1.23
GTF2A1-201ENST00000298173 SYNE1Q8NF91 8797 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-201ENST00000298173 KRTAP12-4P60329 112 aa7.17□□□□□ -1.26
GTF2A1-201ENST00000298173 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
GTF2A1-201ENST00000298173 MT4P47944 62 aa7.16□□□□□ -1.26
GTF2A1-201ENST00000298173 KRTAP9-4Q9BYQ2 154 aa7.14□□□□□ -1.27
GTF2A1-201ENST00000298173 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
GTF2A1-201ENST00000298173 LCE1DQ5T752 114 aa7.1□□□□□ -1.27
GTF2A1-201ENST00000298173 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
GTF2A1-201ENST00000298173 KRTAP20-2Q3LI61 65 aa6.97□□□□□ -1.29
GTF2A1-201ENST00000298173 KRTAP6-2Q3LI66 62 aa6.85□□□□□ -1.31
GTF2A1-201ENST00000298173 GPR98Q8WXG9 6306 aa6.79□□□□□ -1.32
GTF2A1-201ENST00000298173 MT3P25713 68 aa6.77□□□□□ -1.32
GTF2A1-201ENST00000298173 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
GTF2A1-201ENST00000298173 KRTAP5-2Q701N4 177 aa6.75□□□□□ -1.33
GTF2A1-201ENST00000298173 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
GTF2A1-201ENST00000298173 LCE3DQ9BYE3 92 aa6.36□□□□□ -1.39
GTF2A1-201ENST00000298173 AHNAK2Q8IVF2 5795 aa6.29□□□□□ -1.4
GTF2A1-201ENST00000298173 OBSCNQ5VST9 7968 aa6.26□□□□□ -1.41
GTF2A1-201ENST00000298173 INE1O15225 51 aa6.17□□□□□ -1.42
GTF2A1-201ENST00000298173 LCE3EQ5T5B0 92 aa6.16□□□□□ -1.42
GTF2A1-201ENST00000298173 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
GTF2A1-201ENST00000298173 KRTAP5-10Q6L8G5 202 aa6.1□□□□□ -1.43
GTF2A1-201ENST00000298173 H3BS24 57 aa6.03□□□□□ -1.44
GTF2A1-201ENST00000298173 LCE1EQ5T753 118 aa5.98□□□□□ -1.45
GTF2A1-201ENST00000298173 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
GTF2A1-201ENST00000298173 KRTAP5-8O75690 187 aa5.9□□□□□ -1.47
GTF2A1-201ENST00000298173 KRTAP5-1Q6L8H4 278 aa5.88□□□□□ -1.47
GTF2A1-201ENST00000298173 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
GTF2A1-201ENST00000298173 KRTAP4-2Q9BYR5 136 aa5.58□□□□□ -1.52
GTF2A1-201ENST00000298173 LCE1CQ5T751 118 aa5.56□□□□□ -1.52
GTF2A1-201ENST00000298173 LCE1BQ5T7P3 118 aa5.56□□□□□ -1.52
GTF2A1-201ENST00000298173 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
GTF2A1-201ENST00000298173 PRM1P04553 51 aa5.24□□□□□ -1.57
GTF2A1-201ENST00000298173 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.21□□□□□ -1.58
GTF2A1-201ENST00000298173 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
GTF2A1-201ENST00000298173 MUC5BQ9HC84 5762 aaPredicted RBP5.13□□□□□ -1.59
GTF2A1-201ENST00000298173 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
GTF2A1-201ENST00000298173 KRTAP21-2Q3LI59 83 aa4.89□□□□□ -1.63
GTF2A1-201ENST00000298173 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
GTF2A1-201ENST00000298173 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
GTF2A1-201ENST00000298173 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
GTF2A1-201ENST00000298173 PHGR1C9JFL3 82 aa4.23□□□□□ -1.73
GTF2A1-201ENST00000298173 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
GTF2A1-201ENST00000298173 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
GTF2A1-201ENST00000298173 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms