RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 KRTAP19-6Q3LI70 58 aa3.77□□□□□ -1.81
PAPD4-201ENST00000296783 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
PAPD4-201ENST00000296783 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
PAPD4-201ENST00000296783 MT1EP04732 61 aa3.7□□□□□ -1.82
PAPD4-201ENST00000296783 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
PAPD4-201ENST00000296783 MT1LQ93083 61 aa3.68□□□□□ -1.82
PAPD4-201ENST00000296783 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
PAPD4-201ENST00000296783 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
PAPD4-201ENST00000296783 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
PAPD4-201ENST00000296783 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
PAPD4-201ENST00000296783 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
PAPD4-201ENST00000296783 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
PAPD4-201ENST00000296783 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
PAPD4-201ENST00000296783 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
PAPD4-201ENST00000296783 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
PAPD4-201ENST00000296783 INE1O15225 51 aa3.49□□□□□ -1.85
PAPD4-201ENST00000296783 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
PAPD4-201ENST00000296783 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
PAPD4-201ENST00000296783 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
PAPD4-201ENST00000296783 MT1MQ8N339 61 aa3.46□□□□□ -1.85
PAPD4-201ENST00000296783 MT1GP13640 62 aa3.46□□□□□ -1.86
PAPD4-201ENST00000296783 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
PAPD4-201ENST00000296783 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
PAPD4-201ENST00000296783 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
PAPD4-201ENST00000296783 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
PAPD4-201ENST00000296783 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
PAPD4-201ENST00000296783 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
PAPD4-201ENST00000296783 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
PAPD4-201ENST00000296783 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
PAPD4-201ENST00000296783 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
PAPD4-201ENST00000296783 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
PAPD4-201ENST00000296783 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
PAPD4-201ENST00000296783 SPRR2EP22531 72 aa3.12□□□□□ -1.91
PAPD4-201ENST00000296783 SPRR2BP35325 72 aa3.12□□□□□ -1.91
PAPD4-201ENST00000296783 SPRR2AP35326 72 aa3.12□□□□□ -1.91
PAPD4-201ENST00000296783 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
PAPD4-201ENST00000296783 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
PAPD4-201ENST00000296783 MT1AP04731 61 aa3.09□□□□□ -1.92
PAPD4-201ENST00000296783 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
PAPD4-201ENST00000296783 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
PAPD4-201ENST00000296783 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
PAPD4-201ENST00000296783 SPRR2DP22532 72 aa2.99□□□□□ -1.93
PAPD4-201ENST00000296783 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
PAPD4-201ENST00000296783 NEBP20929 6669 aa2.85□□□□□ -1.95
PAPD4-201ENST00000296783 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
PAPD4-201ENST00000296783 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
PAPD4-201ENST00000296783 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
PAPD4-201ENST00000296783 MT3P25713 68 aa2.77□□□□□ -1.97
PAPD4-201ENST00000296783 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
PAPD4-201ENST00000296783 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
PAPD4-201ENST00000296783 PRM1P04553 51 aa2.66□□□□□ -1.98
PAPD4-201ENST00000296783 MT4P47944 62 aa2.62□□□□□ -1.99
PAPD4-201ENST00000296783 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
PAPD4-201ENST00000296783 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
PAPD4-201ENST00000296783 KRTAP2-2Q9BYT5 123 aa2.53□□□□□ -2.01
PAPD4-201ENST00000296783 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
PAPD4-201ENST00000296783 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
PAPD4-201ENST00000296783 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
PAPD4-201ENST00000296783 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
PAPD4-201ENST00000296783 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
PAPD4-201ENST00000296783 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
PAPD4-201ENST00000296783 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
PAPD4-201ENST00000296783 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
PAPD4-201ENST00000296783 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
PAPD4-201ENST00000296783 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
PAPD4-201ENST00000296783 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
PAPD4-201ENST00000296783 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
PAPD4-201ENST00000296783 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
PAPD4-201ENST00000296783 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
PAPD4-201ENST00000296783 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
PAPD4-201ENST00000296783 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
PAPD4-201ENST00000296783 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
PAPD4-201ENST00000296783 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PAPD4-201ENST00000296783 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
PAPD4-201ENST00000296783 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
PAPD4-201ENST00000296783 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
PAPD4-201ENST00000296783 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 55.2 ms