RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 MDN1Q9NU22 5596 aa8.56□□□□□ -1.04
SHISA5-201ENST00000296444 MT1LQ93083 61 aa8.54□□□□□ -1.04
SHISA5-201ENST00000296444 LCE3CQ5T5A8 94 aa8.47□□□□□ -1.05
SHISA5-201ENST00000296444 SPRR2FQ96RM1 72 aa8.46□□□□□ -1.06
SHISA5-201ENST00000296444 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
SHISA5-201ENST00000296444 DSTQ03001 7570 aaKnown RBP8.33□□□□□ -1.08
SHISA5-201ENST00000296444 KRTAP4-3Q9BYR4 195 aa8.33□□□□□ -1.08
SHISA5-201ENST00000296444 KRTAP9-6A8MVA2 160 aa8.28□□□□□ -1.08
SHISA5-201ENST00000296444 KRTAP19-3Q7Z4W3 81 aa8.26□□□□□ -1.09
SHISA5-201ENST00000296444 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.09
SHISA5-201ENST00000296444 KRTAP5-9P26371 169 aa8.18□□□□□ -1.1
SHISA5-201ENST00000296444 MT1MQ8N339 61 aa8.17□□□□□ -1.1
SHISA5-201ENST00000296444 LCE5AQ5TCM9 118 aa8.13□□□□□ -1.11
SHISA5-201ENST00000296444 MT1GP13640 62 aa8.12□□□□□ -1.11
SHISA5-201ENST00000296444 LOC100996750A0A140TA64 210 aa8.06□□□□□ -1.12
SHISA5-201ENST00000296444 LCE1AQ5T7P2 110 aa8.06□□□□□ -1.12
SHISA5-201ENST00000296444 KRTAP2-3P0C7H8 128 aa8.01□□□□□ -1.13
SHISA5-201ENST00000296444 KRTAP2-4Q9BYR9 128 aa8.01□□□□□ -1.13
SHISA5-201ENST00000296444 KRTAP2-1Q9BYU5 128 aa8.01□□□□□ -1.13
SHISA5-201ENST00000296444 KRTAP19-4Q3LI73 84 aa7.95□□□□□ -1.14
SHISA5-201ENST00000296444 SPRR2EP22531 72 aa7.93□□□□□ -1.14
SHISA5-201ENST00000296444 SPRR2BP35325 72 aa7.93□□□□□ -1.14
SHISA5-201ENST00000296444 SPRR2AP35326 72 aa7.93□□□□□ -1.14
SHISA5-201ENST00000296444 KRTAP6-3Q3LI67 103 aa7.91□□□□□ -1.14
SHISA5-201ENST00000296444 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
SHISA5-201ENST00000296444 SPRR2DP22532 72 aa7.6□□□□□ -1.19
SHISA5-201ENST00000296444 NEBP20929 6669 aa7.59□□□□□ -1.19
SHISA5-201ENST00000296444 SYNE1Q8NF91 8797 aaKnown RBP7.39□□□□□ -1.23
SHISA5-201ENST00000296444 KRTAP5-5Q701N2 237 aaPredicted RBP7.34□□□□□ -1.23
SHISA5-201ENST00000296444 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
SHISA5-201ENST00000296444 KRTAP6-1Q3LI64 71 aa7.3□□□□□ -1.24
SHISA5-201ENST00000296444 MT1AP04731 61 aa7.13□□□□□ -1.27
SHISA5-201ENST00000296444 KRTAP12-4P60329 112 aa7.12□□□□□ -1.27
SHISA5-201ENST00000296444 KRTAP4-9Q9BYQ8 210 aa6.96□□□□□ -1.3
SHISA5-201ENST00000296444 KRTAP5-4Q6L8H1 288 aa6.87□□□□□ -1.31
SHISA5-201ENST00000296444 OBSCNQ5VST9 7968 aa6.82□□□□□ -1.32
SHISA5-201ENST00000296444 KRTAP9-4Q9BYQ2 154 aa6.82□□□□□ -1.32
SHISA5-201ENST00000296444 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
SHISA5-201ENST00000296444 MT4P47944 62 aa6.77□□□□□ -1.32
SHISA5-201ENST00000296444 KRTAP2-2Q9BYT5 123 aa6.75□□□□□ -1.33
SHISA5-201ENST00000296444 HMCN1Q96RW7 5635 aa6.74□□□□□ -1.33
SHISA5-201ENST00000296444 KRTAP20-1Q3LI63 56 aa6.73□□□□□ -1.33
SHISA5-201ENST00000296444 KRTAP6-2Q3LI66 62 aa6.68□□□□□ -1.34
SHISA5-201ENST00000296444 LCE1DQ5T752 114 aa6.57□□□□□ -1.36
SHISA5-201ENST00000296444 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
SHISA5-201ENST00000296444 KRTAP20-2Q3LI61 65 aa6.49□□□□□ -1.37
SHISA5-201ENST00000296444 LCE3DQ9BYE3 92 aa6.49□□□□□ -1.37
SHISA5-201ENST00000296444 LCE3EQ5T5B0 92 aa6.47□□□□□ -1.37
SHISA5-201ENST00000296444 MT3P25713 68 aa6.42□□□□□ -1.38
SHISA5-201ENST00000296444 PRM1P04553 51 aa6.35□□□□□ -1.39
SHISA5-201ENST00000296444 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
SHISA5-201ENST00000296444 KRTAP5-2Q701N4 177 aa6.25□□□□□ -1.41
SHISA5-201ENST00000296444 AHNAK2Q8IVF2 5795 aa5.76□□□□□ -1.49
SHISA5-201ENST00000296444 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
SHISA5-201ENST00000296444 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
SHISA5-201ENST00000296444 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
SHISA5-201ENST00000296444 LCE1EQ5T753 118 aa5.46□□□□□ -1.54
SHISA5-201ENST00000296444 LCE1BQ5T7P3 118 aa5.42□□□□□ -1.54
SHISA5-201ENST00000296444 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
SHISA5-201ENST00000296444 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
SHISA5-201ENST00000296444 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
SHISA5-201ENST00000296444 LCE1CQ5T751 118 aa5.16□□□□□ -1.58
SHISA5-201ENST00000296444 GPR98Q8WXG9 6306 aa5.1□□□□□ -1.59
SHISA5-201ENST00000296444 LCE1FQ5T754 118 aa5.08□□□□□ -1.6
SHISA5-201ENST00000296444 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
SHISA5-201ENST00000296444 MUC5BQ9HC84 5762 aaPredicted RBP5.05□□□□□ -1.6
SHISA5-201ENST00000296444 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
SHISA5-201ENST00000296444 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
SHISA5-201ENST00000296444 KRTAP21-2Q3LI59 83 aa4.74□□□□□ -1.65
SHISA5-201ENST00000296444 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
SHISA5-201ENST00000296444 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
SHISA5-201ENST00000296444 KRTAP4-4Q9BYR3 166 aa4.43□□□□□ -1.7
SHISA5-201ENST00000296444 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
SHISA5-201ENST00000296444 KRTAP21-1Q3LI58 79 aa4.13□□□□□ -1.75
SHISA5-201ENST00000296444 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
SHISA5-201ENST00000296444 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
SHISA5-201ENST00000296444 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms