RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
CCDC78-201ENST00000293889 MDN1Q9NU22 5596 aa6.64□□□□□ -1.35
CCDC78-201ENST00000293889 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
CCDC78-201ENST00000293889 SPRR2EP22531 72 aa6.56□□□□□ -1.36
CCDC78-201ENST00000293889 SPRR2BP35325 72 aa6.56□□□□□ -1.36
CCDC78-201ENST00000293889 SPRR2AP35326 72 aa6.56□□□□□ -1.36
CCDC78-201ENST00000293889 LCE1AQ5T7P2 110 aa6.54□□□□□ -1.36
CCDC78-201ENST00000293889 MT1EP04732 61 aa6.53□□□□□ -1.36
CCDC78-201ENST00000293889 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
CCDC78-201ENST00000293889 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
CCDC78-201ENST00000293889 MT1LQ93083 61 aa6.35□□□□□ -1.39
CCDC78-201ENST00000293889 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
CCDC78-201ENST00000293889 KRTAP19-3Q7Z4W3 81 aa6.33□□□□□ -1.4
CCDC78-201ENST00000293889 SPRR2DP22532 72 aa6.32□□□□□ -1.4
CCDC78-201ENST00000293889 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
CCDC78-201ENST00000293889 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
CCDC78-201ENST00000293889 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
CCDC78-201ENST00000293889 MT1GP13640 62 aa6.25□□□□□ -1.41
CCDC78-201ENST00000293889 MT1MQ8N339 61 aa6.17□□□□□ -1.42
CCDC78-201ENST00000293889 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
CCDC78-201ENST00000293889 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
CCDC78-201ENST00000293889 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
CCDC78-201ENST00000293889 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
CCDC78-201ENST00000293889 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
CCDC78-201ENST00000293889 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
CCDC78-201ENST00000293889 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
CCDC78-201ENST00000293889 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
CCDC78-201ENST00000293889 INE1O15225 51 aa5.95□□□□□ -1.46
CCDC78-201ENST00000293889 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
CCDC78-201ENST00000293889 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
CCDC78-201ENST00000293889 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
CCDC78-201ENST00000293889 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
CCDC78-201ENST00000293889 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
CCDC78-201ENST00000293889 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
CCDC78-201ENST00000293889 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
CCDC78-201ENST00000293889 MT4P47944 62 aa5.52□□□□□ -1.53
CCDC78-201ENST00000293889 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
CCDC78-201ENST00000293889 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
CCDC78-201ENST00000293889 MT1AP04731 61 aa5.39□□□□□ -1.55
CCDC78-201ENST00000293889 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
CCDC78-201ENST00000293889 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
CCDC78-201ENST00000293889 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
CCDC78-201ENST00000293889 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
CCDC78-201ENST00000293889 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
CCDC78-201ENST00000293889 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
CCDC78-201ENST00000293889 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.59
CCDC78-201ENST00000293889 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.6
CCDC78-201ENST00000293889 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
CCDC78-201ENST00000293889 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
CCDC78-201ENST00000293889 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
CCDC78-201ENST00000293889 MT3P25713 68 aa4.9□□□□□ -1.62
CCDC78-201ENST00000293889 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
CCDC78-201ENST00000293889 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
CCDC78-201ENST00000293889 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
CCDC78-201ENST00000293889 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
CCDC78-201ENST00000293889 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
CCDC78-201ENST00000293889 KRTAP5-8O75690 187 aa4.56□□□□□ -1.68
CCDC78-201ENST00000293889 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.7
CCDC78-201ENST00000293889 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
CCDC78-201ENST00000293889 PRM1P04553 51 aa4.27□□□□□ -1.73
CCDC78-201ENST00000293889 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
CCDC78-201ENST00000293889 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.73
CCDC78-201ENST00000293889 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
CCDC78-201ENST00000293889 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
CCDC78-201ENST00000293889 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
CCDC78-201ENST00000293889 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
CCDC78-201ENST00000293889 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
CCDC78-201ENST00000293889 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
CCDC78-201ENST00000293889 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
CCDC78-201ENST00000293889 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
CCDC78-201ENST00000293889 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
CCDC78-201ENST00000293889 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
CCDC78-201ENST00000293889 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
CCDC78-201ENST00000293889 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
CCDC78-201ENST00000293889 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
CCDC78-201ENST00000293889 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
CCDC78-201ENST00000293889 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 62.6 ms