RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 KRTAP12-1P59990 96 aa2.74□□□□□ -1.97
SSX2B-201ENST00000288839 Q1T7F1 81 aa2.74□□□□□ -1.97
SSX2B-201ENST00000288839 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
SSX2B-201ENST00000288839 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
SSX2B-201ENST00000288839 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
SSX2B-201ENST00000288839 SMIM26A0A096LP01 95 aa2.73□□□□□ -1.97
SSX2B-201ENST00000288839 KRTAP10-12P60413 245 aa2.71□□□□□ -1.98
SSX2B-201ENST00000288839 KRTAP8-1Q8IUC2 63 aa2.71□□□□□ -1.98
SSX2B-201ENST00000288839 V9GYY9 64 aa2.71□□□□□ -1.98
SSX2B-201ENST00000288839 SPRR2EP22531 72 aa2.69□□□□□ -1.98
SSX2B-201ENST00000288839 SPRR2BP35325 72 aa2.69□□□□□ -1.98
SSX2B-201ENST00000288839 SPRR2AP35326 72 aa2.69□□□□□ -1.98
SSX2B-201ENST00000288839 PSPHP1O15172 72 aa2.68□□□□□ -1.98
SSX2B-201ENST00000288839 UQCR11O14957 56 aa2.67□□□□□ -1.98
SSX2B-201ENST00000288839 MIR22HGQ0VDD5 57 aa2.63□□□□□ -1.99
SSX2B-201ENST00000288839 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
SSX2B-201ENST00000288839 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
SSX2B-201ENST00000288839 C10orf95Q9H7T3 257 aa2.61□□□□□ -1.99
SSX2B-201ENST00000288839 SPRR2DP22532 72 aa2.6□□□□□ -1.99
SSX2B-201ENST00000288839 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
SSX2B-201ENST00000288839 A6NED7 52 aa2.59□□□□□ -1.99
SSX2B-201ENST00000288839 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
SSX2B-201ENST00000288839 TNP1P09430 55 aa2.56□□□□□ -2
SSX2B-201ENST00000288839 KRTAP19-7Q3SYF9 63 aa2.56□□□□□ -2
SSX2B-201ENST00000288839 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
SSX2B-201ENST00000288839 K7ERS5 55 aa2.54□□□□□ -2
SSX2B-201ENST00000288839 KRTAP19-5Q3LI72 72 aa2.54□□□□□ -2
SSX2B-201ENST00000288839 LCE3AQ5TA76 89 aa2.54□□□□□ -2
SSX2B-201ENST00000288839 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
SSX2B-201ENST00000288839 MT1EP04732 61 aa2.53□□□□□ -2
SSX2B-201ENST00000288839 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
SSX2B-201ENST00000288839 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
SSX2B-201ENST00000288839 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
SSX2B-201ENST00000288839 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
SSX2B-201ENST00000288839 PRAC1Q96KF2 57 aa2.46□□□□□ -2.02
SSX2B-201ENST00000288839 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
SSX2B-201ENST00000288839 MT1LQ93083 61 aa2.44□□□□□ -2.02
SSX2B-201ENST00000288839 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
SSX2B-201ENST00000288839 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
SSX2B-201ENST00000288839 MT1GP13640 62 aa2.42□□□□□ -2.02
SSX2B-201ENST00000288839 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
SSX2B-201ENST00000288839 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
SSX2B-201ENST00000288839 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
SSX2B-201ENST00000288839 ROMO1P60602 79 aa2.41□□□□□ -2.02
SSX2B-201ENST00000288839 MT1MQ8N339 61 aa2.4□□□□□ -2.03
SSX2B-201ENST00000288839 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
SSX2B-201ENST00000288839 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
SSX2B-201ENST00000288839 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
SSX2B-201ENST00000288839 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
SSX2B-201ENST00000288839 MT4P47944 62 aa2.31□□□□□ -2.04
SSX2B-201ENST00000288839 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
SSX2B-201ENST00000288839 PMAIP1Q13794 54 aa2.28□□□□□ -2.04
SSX2B-201ENST00000288839 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
SSX2B-201ENST00000288839 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
SSX2B-201ENST00000288839 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
SSX2B-201ENST00000288839 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
SSX2B-201ENST00000288839 KTN1-AS1Q86SY8 53 aa2.14□□□□□ -2.07
SSX2B-201ENST00000288839 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
SSX2B-201ENST00000288839 MT1AP04731 61 aa2.07□□□□□ -2.08
SSX2B-201ENST00000288839 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
SSX2B-201ENST00000288839 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
SSX2B-201ENST00000288839 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
SSX2B-201ENST00000288839 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
SSX2B-201ENST00000288839 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
SSX2B-201ENST00000288839 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
SSX2B-201ENST00000288839 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
SSX2B-201ENST00000288839 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
SSX2B-201ENST00000288839 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
SSX2B-201ENST00000288839 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
SSX2B-201ENST00000288839 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
SSX2B-201ENST00000288839 LUZP6Q538Z0 58 aa1.76□□□□□ -2.13
SSX2B-201ENST00000288839 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
SSX2B-201ENST00000288839 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
SSX2B-201ENST00000288839 INE1O15225 51 aa1.33□□□□□ -2.2
SSX2B-201ENST00000288839 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
SSX2B-201ENST00000288839 PRM1P04553 51 aa1.25□□□□□ -2.21
SSX2B-201ENST00000288839 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
SSX2B-201ENST00000288839 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 37.5 ms