RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 MT2AP02795 61 aa3.55□□□□□ -1.84
HMBOX1-201ENST00000287701 MT1FP04733 61 aa3.55□□□□□ -1.84
HMBOX1-201ENST00000287701 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
HMBOX1-201ENST00000287701 KMT2DO14686 5537 aa3.52□□□□□ -1.85
HMBOX1-201ENST00000287701 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
HMBOX1-201ENST00000287701 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
HMBOX1-201ENST00000287701 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
HMBOX1-201ENST00000287701 USH2AO75445 5202 aa3.5□□□□□ -1.85
HMBOX1-201ENST00000287701 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
HMBOX1-201ENST00000287701 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
HMBOX1-201ENST00000287701 M0R2T5 61 aa3.46□□□□□ -1.86
HMBOX1-201ENST00000287701 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
HMBOX1-201ENST00000287701 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
HMBOX1-201ENST00000287701 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
HMBOX1-201ENST00000287701 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
HMBOX1-201ENST00000287701 KRTAP9-3Q9BYQ3 159 aa3.37□□□□□ -1.87
HMBOX1-201ENST00000287701 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
HMBOX1-201ENST00000287701 NEBP20929 6669 aa3.28□□□□□ -1.88
HMBOX1-201ENST00000287701 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
HMBOX1-201ENST00000287701 SYNE2Q8WXH0 6885 aaKnown RBP3.24□□□□□ -1.89
HMBOX1-201ENST00000287701 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
HMBOX1-201ENST00000287701 MT1LQ93083 61 aa3.2□□□□□ -1.9
HMBOX1-201ENST00000287701 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
HMBOX1-201ENST00000287701 MT1EP04732 61 aa3.17□□□□□ -1.9
HMBOX1-201ENST00000287701 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
HMBOX1-201ENST00000287701 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
HMBOX1-201ENST00000287701 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
HMBOX1-201ENST00000287701 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
HMBOX1-201ENST00000287701 MT1AP04731 61 aa3.01□□□□□ -1.93
HMBOX1-201ENST00000287701 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
HMBOX1-201ENST00000287701 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
HMBOX1-201ENST00000287701 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
HMBOX1-201ENST00000287701 MDN1Q9NU22 5596 aa2.96□□□□□ -1.93
HMBOX1-201ENST00000287701 MT1GP13640 62 aa2.95□□□□□ -1.94
HMBOX1-201ENST00000287701 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
HMBOX1-201ENST00000287701 PRM1P04553 51 aa2.91□□□□□ -1.94
HMBOX1-201ENST00000287701 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
HMBOX1-201ENST00000287701 MT1MQ8N339 61 aa2.9□□□□□ -1.95
HMBOX1-201ENST00000287701 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
HMBOX1-201ENST00000287701 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
HMBOX1-201ENST00000287701 SPRR2EP22531 72 aa2.86□□□□□ -1.95
HMBOX1-201ENST00000287701 SPRR2BP35325 72 aa2.86□□□□□ -1.95
HMBOX1-201ENST00000287701 SPRR2AP35326 72 aa2.86□□□□□ -1.95
HMBOX1-201ENST00000287701 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
HMBOX1-201ENST00000287701 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
HMBOX1-201ENST00000287701 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
HMBOX1-201ENST00000287701 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.95
HMBOX1-201ENST00000287701 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
HMBOX1-201ENST00000287701 SPRR2DP22532 72 aa2.78□□□□□ -1.96
HMBOX1-201ENST00000287701 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
HMBOX1-201ENST00000287701 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
HMBOX1-201ENST00000287701 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
HMBOX1-201ENST00000287701 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
HMBOX1-201ENST00000287701 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -2
HMBOX1-201ENST00000287701 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
HMBOX1-201ENST00000287701 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
HMBOX1-201ENST00000287701 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
HMBOX1-201ENST00000287701 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
HMBOX1-201ENST00000287701 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
HMBOX1-201ENST00000287701 MT3P25713 68 aa2.4□□□□□ -2.03
HMBOX1-201ENST00000287701 MT4P47944 62 aa2.37□□□□□ -2.03
HMBOX1-201ENST00000287701 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
HMBOX1-201ENST00000287701 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
HMBOX1-201ENST00000287701 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
HMBOX1-201ENST00000287701 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
HMBOX1-201ENST00000287701 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
HMBOX1-201ENST00000287701 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
HMBOX1-201ENST00000287701 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
HMBOX1-201ENST00000287701 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
HMBOX1-201ENST00000287701 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
HMBOX1-201ENST00000287701 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
HMBOX1-201ENST00000287701 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
HMBOX1-201ENST00000287701 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
HMBOX1-201ENST00000287701 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
HMBOX1-201ENST00000287701 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
HMBOX1-201ENST00000287701 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
HMBOX1-201ENST00000287701 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 173 ms