RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 CMYA5Q8N3K9 4069 aa1.34□□□□□ -2.2
SEMA3D-201ENST00000284136 APOBP04114 4563 aaKnown RBP1.33□□□□□ -2.2
SEMA3D-201ENST00000284136 HECTD4Q9Y4D8 3996 aa1.33□□□□□ -2.2
SEMA3D-201ENST00000284136 KRTAP13-4Q3LI77 160 aa1.31□□□□□ -2.2
SEMA3D-201ENST00000284136 HYDINQ4G0P3 5121 aa1.31□□□□□ -2.2
SEMA3D-201ENST00000284136 LRP2P98164 4655 aa1.3□□□□□ -2.2
SEMA3D-201ENST00000284136 KMT2CQ8NEZ4 4911 aaKnown RBP1.29□□□□□ -2.2
SEMA3D-201ENST00000284136 CCDC179H3BU77 68 aa1.28□□□□□ -2.2
SEMA3D-201ENST00000284136 MUC2Q02817 5179 aa1.28□□□□□ -2.2
SEMA3D-201ENST00000284136 KRTAP9-3Q9BYQ3 159 aa1.28□□□□□ -2.2
SEMA3D-201ENST00000284136 KRTAP3-1Q9BYR8 98 aa1.28□□□□□ -2.2
SEMA3D-201ENST00000284136 ABCA13Q86UQ4 5058 aa1.28□□□□□ -2.2
SEMA3D-201ENST00000284136 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
SEMA3D-201ENST00000284136 LCE4AQ5TA78 99 aa1.27□□□□□ -2.21
SEMA3D-201ENST00000284136 DNAH8Q96JB1 4490 aa1.25□□□□□ -2.21
SEMA3D-201ENST00000284136 MUC17Q685J3 4493 aa1.25□□□□□ -2.21
SEMA3D-201ENST00000284136 DNAH2Q9P225 4427 aa1.25□□□□□ -2.21
SEMA3D-201ENST00000284136 SPRR2GQ9BYE4 73 aa1.24□□□□□ -2.21
SEMA3D-201ENST00000284136 VPS13DQ5THJ4 4388 aa1.24□□□□□ -2.21
SEMA3D-201ENST00000284136 KRTAP19-3Q7Z4W3 81 aa1.23□□□□□ -2.21
SEMA3D-201ENST00000284136 PKD1P98161 4303 aa1.23□□□□□ -2.21
SEMA3D-201ENST00000284136 OCR1Q9BZK8 76 aa1.23□□□□□ -2.21
SEMA3D-201ENST00000284136 LRP1Q07954 4544 aaKnown RBP1.23□□□□□ -2.21
SEMA3D-201ENST00000284136 KMT2DO14686 5537 aa1.22□□□□□ -2.21
SEMA3D-201ENST00000284136 TNXBP22105 4242 aa1.21□□□□□ -2.22
SEMA3D-201ENST00000284136 PRAC1Q96KF2 57 aa1.2□□□□□ -2.22
SEMA3D-201ENST00000284136 LCE3EQ5T5B0 92 aa1.19□□□□□ -2.22
SEMA3D-201ENST00000284136 KRTAP4-3Q9BYR4 195 aa1.19□□□□□ -2.22
SEMA3D-201ENST00000284136 PRO0628Q9UI54 55 aa1.19□□□□□ -2.22
SEMA3D-201ENST00000284136 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
SEMA3D-201ENST00000284136 OBSCNQ5VST9 7968 aa1.18□□□□□ -2.22
SEMA3D-201ENST00000284136 KRTAP19-4Q3LI73 84 aa1.18□□□□□ -2.22
SEMA3D-201ENST00000284136 LINC01558Q9Y6Z2 57 aa1.17□□□□□ -2.22
SEMA3D-201ENST00000284136 RNF213Q63HN8 5207 aa1.17□□□□□ -2.22
SEMA3D-201ENST00000284136 MT1BP07438 61 aa1.17□□□□□ -2.22
SEMA3D-201ENST00000284136 KRTAP12-1P59990 96 aa1.17□□□□□ -2.22
SEMA3D-201ENST00000284136 KRTAP9-6A8MVA2 160 aa1.16□□□□□ -2.22
SEMA3D-201ENST00000284136 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
SEMA3D-201ENST00000284136 MT3P25713 68 aa1.15□□□□□ -2.23
SEMA3D-201ENST00000284136 KRTAP19-8Q3LI54 63 aa1.14□□□□□ -2.23
SEMA3D-201ENST00000284136 FAT4Q6V0I7 4981 aa1.14□□□□□ -2.23
SEMA3D-201ENST00000284136 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
SEMA3D-201ENST00000284136 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
SEMA3D-201ENST00000284136 MT1XP80297 61 aa1.13□□□□□ -2.23
SEMA3D-201ENST00000284136 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
SEMA3D-201ENST00000284136 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
SEMA3D-201ENST00000284136 MT1MQ8N339 61 aa1.11□□□□□ -2.23
SEMA3D-201ENST00000284136 KRTAP4-4Q9BYR3 166 aa1.09□□□□□ -2.24
SEMA3D-201ENST00000284136 LCE3DQ9BYE3 92 aa1.08□□□□□ -2.24
SEMA3D-201ENST00000284136 LCE3CQ5T5A8 94 aa1.08□□□□□ -2.24
SEMA3D-201ENST00000284136 KRTAP6-2Q3LI66 62 aa1.07□□□□□ -2.24
SEMA3D-201ENST00000284136 MT1EP04732 61 aa1.06□□□□□ -2.24
SEMA3D-201ENST00000284136 SSPOA2VEC9 5147 aa1.05□□□□□ -2.24
SEMA3D-201ENST00000284136 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
SEMA3D-201ENST00000284136 NDUFAF8A1L188 74 aa1.03□□□□□ -2.24
SEMA3D-201ENST00000284136 HMCN2Q8NDA2 5059 aa1.02□□□□□ -2.25
SEMA3D-201ENST00000284136 MT1LQ93083 61 aa1.02□□□□□ -2.25
SEMA3D-201ENST00000284136 MDN1Q9NU22 5596 aa1□□□□□ -2.25
SEMA3D-201ENST00000284136 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
SEMA3D-201ENST00000284136 USH2AO75445 5202 aa0.99□□□□□ -2.25
SEMA3D-201ENST00000284136 KRTAP19-2Q3LHN2 52 aa0.99□□□□□ -2.25
SEMA3D-201ENST00000284136 SYNE1Q8NF91 8797 aaKnown RBP0.98□□□□□ -2.25
SEMA3D-201ENST00000284136 FCGBPQ9Y6R7 5405 aaPredicted RBP0.97□□□□□ -2.25
SEMA3D-201ENST00000284136 MUC19Q7Z5P9 8384 aa0.97□□□□□ -2.25
SEMA3D-201ENST00000284136 KRTAP19-7Q3SYF9 63 aa0.96□□□□□ -2.26
SEMA3D-201ENST00000284136 FLGP20930 4061 aaPredicted RBP0.96□□□□□ -2.26
SEMA3D-201ENST00000284136 KRTAP6-1Q3LI64 71 aa0.92□□□□□ -2.26
SEMA3D-201ENST00000284136 MT1AP04731 61 aa0.92□□□□□ -2.26
SEMA3D-201ENST00000284136 MUC12Q9UKN1 5478 aa0.86□□□□□ -2.27
SEMA3D-201ENST00000284136 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
SEMA3D-201ENST00000284136 KRTAP5-7Q6L8G8 165 aa0.85□□□□□ -2.27
SEMA3D-201ENST00000284136 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
SEMA3D-201ENST00000284136 PRM1P04553 51 aa0.78□□□□□ -2.28
SEMA3D-201ENST00000284136 INE1O15225 51 aa0.76□□□□□ -2.29
SEMA3D-201ENST00000284136 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
SEMA3D-201ENST00000284136 KRTAP21-2Q3LI59 83 aa0.6□□□□□ -2.31
SEMA3D-201ENST00000284136 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 108 ms