RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
PDCD4-201ENST00000280154 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
PDCD4-201ENST00000280154 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
PDCD4-201ENST00000280154 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
PDCD4-201ENST00000280154 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
PDCD4-201ENST00000280154 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
PDCD4-201ENST00000280154 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
PDCD4-201ENST00000280154 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
PDCD4-201ENST00000280154 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.88
PDCD4-201ENST00000280154 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
PDCD4-201ENST00000280154 KRTAP4-8A0A0G2JLE6 195 aa3.3□□□□□ -1.88
PDCD4-201ENST00000280154 KRTAP4-8Q9BYQ9 185 aa3.3□□□□□ -1.88
PDCD4-201ENST00000280154 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
PDCD4-201ENST00000280154 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
PDCD4-201ENST00000280154 MT1EP04732 61 aa3.29□□□□□ -1.88
PDCD4-201ENST00000280154 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
PDCD4-201ENST00000280154 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
PDCD4-201ENST00000280154 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.89
PDCD4-201ENST00000280154 KMT2DO14686 5537 aa3.2□□□□□ -1.9
PDCD4-201ENST00000280154 MT1LQ93083 61 aa3.18□□□□□ -1.9
PDCD4-201ENST00000280154 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
PDCD4-201ENST00000280154 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
PDCD4-201ENST00000280154 MT1GP13640 62 aa3.13□□□□□ -1.91
PDCD4-201ENST00000280154 NEBP20929 6669 aa3.13□□□□□ -1.91
PDCD4-201ENST00000280154 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
PDCD4-201ENST00000280154 SPRR2EP22531 72 aa3.1□□□□□ -1.91
PDCD4-201ENST00000280154 SPRR2BP35325 72 aa3.1□□□□□ -1.91
PDCD4-201ENST00000280154 SPRR2AP35326 72 aa3.1□□□□□ -1.91
PDCD4-201ENST00000280154 MT1MQ8N339 61 aa3.08□□□□□ -1.92
PDCD4-201ENST00000280154 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
PDCD4-201ENST00000280154 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
PDCD4-201ENST00000280154 PRM1P04553 51 aa3.04□□□□□ -1.92
PDCD4-201ENST00000280154 MT3P25713 68 aa3.02□□□□□ -1.93
PDCD4-201ENST00000280154 SPRR2DP22532 72 aa3.01□□□□□ -1.93
PDCD4-201ENST00000280154 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
PDCD4-201ENST00000280154 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
PDCD4-201ENST00000280154 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
PDCD4-201ENST00000280154 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
PDCD4-201ENST00000280154 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
PDCD4-201ENST00000280154 LCE3BQ5TA77 95 aa2.92□□□□□ -1.94
PDCD4-201ENST00000280154 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
PDCD4-201ENST00000280154 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
PDCD4-201ENST00000280154 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
PDCD4-201ENST00000280154 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
PDCD4-201ENST00000280154 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
PDCD4-201ENST00000280154 MT1AP04731 61 aa2.74□□□□□ -1.97
PDCD4-201ENST00000280154 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
PDCD4-201ENST00000280154 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
PDCD4-201ENST00000280154 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
PDCD4-201ENST00000280154 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
PDCD4-201ENST00000280154 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
PDCD4-201ENST00000280154 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
PDCD4-201ENST00000280154 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
PDCD4-201ENST00000280154 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
PDCD4-201ENST00000280154 MT4P47944 62 aa2.5□□□□□ -2.01
PDCD4-201ENST00000280154 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
PDCD4-201ENST00000280154 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
PDCD4-201ENST00000280154 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
PDCD4-201ENST00000280154 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
PDCD4-201ENST00000280154 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
PDCD4-201ENST00000280154 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
PDCD4-201ENST00000280154 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
PDCD4-201ENST00000280154 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
PDCD4-201ENST00000280154 KRTAP4-11Q9BYQ6 195 aa2.29□□□□□ -2.04
PDCD4-201ENST00000280154 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
PDCD4-201ENST00000280154 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
PDCD4-201ENST00000280154 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
PDCD4-201ENST00000280154 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
PDCD4-201ENST00000280154 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
PDCD4-201ENST00000280154 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
PDCD4-201ENST00000280154 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
PDCD4-201ENST00000280154 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
PDCD4-201ENST00000280154 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
PDCD4-201ENST00000280154 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
PDCD4-201ENST00000280154 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
PDCD4-201ENST00000280154 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
PDCD4-201ENST00000280154 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 55.3 ms