RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 SPRR2BP35325 72 aa6.26□□□□□ -1.41
SKP2-201ENST00000274254 SPRR2AP35326 72 aa6.26□□□□□ -1.41
SKP2-201ENST00000274254 KTN1-AS1Q86SY8 53 aa6.26□□□□□ -1.41
SKP2-201ENST00000274254 MDN1Q9NU22 5596 aa6.26□□□□□ -1.41
SKP2-201ENST00000274254 NEBP20929 6669 aa6.24□□□□□ -1.41
SKP2-201ENST00000274254 PRAC1Q96KF2 57 aa6.2□□□□□ -1.42
SKP2-201ENST00000274254 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
SKP2-201ENST00000274254 MT1LQ93083 61 aa6.15□□□□□ -1.42
SKP2-201ENST00000274254 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
SKP2-201ENST00000274254 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
SKP2-201ENST00000274254 MT1GP13640 62 aa6.09□□□□□ -1.44
SKP2-201ENST00000274254 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
SKP2-201ENST00000274254 SPRR2DP22532 72 aa6.04□□□□□ -1.44
SKP2-201ENST00000274254 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
SKP2-201ENST00000274254 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
SKP2-201ENST00000274254 MT1MQ8N339 61 aa5.99□□□□□ -1.45
SKP2-201ENST00000274254 KRTAP4-12Q9BQ66 201 aa5.97□□□□□ -1.45
SKP2-201ENST00000274254 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
SKP2-201ENST00000274254 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
SKP2-201ENST00000274254 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
SKP2-201ENST00000274254 KRTAP20-1Q3LI63 56 aa5.89□□□□□ -1.47
SKP2-201ENST00000274254 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
SKP2-201ENST00000274254 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
SKP2-201ENST00000274254 LCE3CQ5T5A8 94 aa5.84□□□□□ -1.48
SKP2-201ENST00000274254 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
SKP2-201ENST00000274254 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
SKP2-201ENST00000274254 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
SKP2-201ENST00000274254 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
SKP2-201ENST00000274254 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
SKP2-201ENST00000274254 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
SKP2-201ENST00000274254 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
SKP2-201ENST00000274254 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
SKP2-201ENST00000274254 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
SKP2-201ENST00000274254 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
SKP2-201ENST00000274254 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
SKP2-201ENST00000274254 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
SKP2-201ENST00000274254 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
SKP2-201ENST00000274254 MT1AP04731 61 aa5.24□□□□□ -1.57
SKP2-201ENST00000274254 MT4P47944 62 aa5.24□□□□□ -1.57
SKP2-201ENST00000274254 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
SKP2-201ENST00000274254 KRTAP12-4P60329 112 aa5.15□□□□□ -1.58
SKP2-201ENST00000274254 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
SKP2-201ENST00000274254 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
SKP2-201ENST00000274254 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
SKP2-201ENST00000274254 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
SKP2-201ENST00000274254 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
SKP2-201ENST00000274254 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
SKP2-201ENST00000274254 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
SKP2-201ENST00000274254 H3BS24 57 aa4.83□□□□□ -1.64
SKP2-201ENST00000274254 MT3P25713 68 aa4.76□□□□□ -1.65
SKP2-201ENST00000274254 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
SKP2-201ENST00000274254 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
SKP2-201ENST00000274254 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
SKP2-201ENST00000274254 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
SKP2-201ENST00000274254 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
SKP2-201ENST00000274254 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
SKP2-201ENST00000274254 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
SKP2-201ENST00000274254 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
SKP2-201ENST00000274254 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
SKP2-201ENST00000274254 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
SKP2-201ENST00000274254 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
SKP2-201ENST00000274254 INE1O15225 51 aa4.12□□□□□ -1.75
SKP2-201ENST00000274254 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
SKP2-201ENST00000274254 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
SKP2-201ENST00000274254 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
SKP2-201ENST00000274254 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SKP2-201ENST00000274254 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
SKP2-201ENST00000274254 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
SKP2-201ENST00000274254 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
SKP2-201ENST00000274254 PRM1P04553 51 aa3.43□□□□□ -1.86
SKP2-201ENST00000274254 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
SKP2-201ENST00000274254 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.88
SKP2-201ENST00000274254 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
SKP2-201ENST00000274254 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
SKP2-201ENST00000274254 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
SKP2-201ENST00000274254 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SKP2-201ENST00000274254 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms