RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
LYSMD2-201ENST00000267838 MT1LQ93083 61 aa7.3□□□□□ -1.24
LYSMD2-201ENST00000267838 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
LYSMD2-201ENST00000267838 INE1O15225 51 aa7.27□□□□□ -1.25
LYSMD2-201ENST00000267838 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
LYSMD2-201ENST00000267838 SPRR2FQ96RM1 72 aa7.2□□□□□ -1.26
LYSMD2-201ENST00000267838 KRTAP5-9P26371 169 aa7.11□□□□□ -1.27
LYSMD2-201ENST00000267838 KRTAP6-3Q3LI67 103 aa7.11□□□□□ -1.27
LYSMD2-201ENST00000267838 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
LYSMD2-201ENST00000267838 KRTAP19-3Q7Z4W3 81 aa7.1□□□□□ -1.27
LYSMD2-201ENST00000267838 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
LYSMD2-201ENST00000267838 MT1GP13640 62 aa7.05□□□□□ -1.28
LYSMD2-201ENST00000267838 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
LYSMD2-201ENST00000267838 MT1MQ8N339 61 aa6.98□□□□□ -1.29
LYSMD2-201ENST00000267838 LCE5AQ5TCM9 118 aa6.97□□□□□ -1.29
LYSMD2-201ENST00000267838 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
LYSMD2-201ENST00000267838 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.3
LYSMD2-201ENST00000267838 KRTAP4-3Q9BYR4 195 aa6.88□□□□□ -1.31
LYSMD2-201ENST00000267838 LCE1AQ5T7P2 110 aa6.87□□□□□ -1.31
LYSMD2-201ENST00000267838 SPRR2EP22531 72 aa6.84□□□□□ -1.31
LYSMD2-201ENST00000267838 SPRR2BP35325 72 aa6.84□□□□□ -1.31
LYSMD2-201ENST00000267838 SPRR2AP35326 72 aa6.84□□□□□ -1.31
LYSMD2-201ENST00000267838 NEBP20929 6669 aa6.75□□□□□ -1.33
LYSMD2-201ENST00000267838 KRTAP2-3P0C7H8 128 aa6.74□□□□□ -1.33
LYSMD2-201ENST00000267838 KRTAP2-4Q9BYR9 128 aa6.74□□□□□ -1.33
LYSMD2-201ENST00000267838 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
LYSMD2-201ENST00000267838 SPRR2DP22532 72 aa6.59□□□□□ -1.35
LYSMD2-201ENST00000267838 DSTQ03001 7570 aaKnown RBP6.54□□□□□ -1.36
LYSMD2-201ENST00000267838 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
LYSMD2-201ENST00000267838 KRTAP9-9Q9BYP9 154 aa6.35□□□□□ -1.39
LYSMD2-201ENST00000267838 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
LYSMD2-201ENST00000267838 KRTAP5-5Q701N2 237 aaPredicted RBP6.28□□□□□ -1.4
LYSMD2-201ENST00000267838 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
LYSMD2-201ENST00000267838 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.41
LYSMD2-201ENST00000267838 MT1AP04731 61 aa6.19□□□□□ -1.42
LYSMD2-201ENST00000267838 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
LYSMD2-201ENST00000267838 KRTAP2-2Q9BYT5 123 aa6.12□□□□□ -1.43
LYSMD2-201ENST00000267838 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
LYSMD2-201ENST00000267838 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
LYSMD2-201ENST00000267838 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
LYSMD2-201ENST00000267838 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
LYSMD2-201ENST00000267838 KRTAP12-4P60329 112 aa5.9□□□□□ -1.46
LYSMD2-201ENST00000267838 SYNE1Q8NF91 8797 aaKnown RBP5.89□□□□□ -1.47
LYSMD2-201ENST00000267838 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
LYSMD2-201ENST00000267838 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
LYSMD2-201ENST00000267838 MT4P47944 62 aa5.75□□□□□ -1.49
LYSMD2-201ENST00000267838 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.51
LYSMD2-201ENST00000267838 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
LYSMD2-201ENST00000267838 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
LYSMD2-201ENST00000267838 MT3P25713 68 aa5.6□□□□□ -1.51
LYSMD2-201ENST00000267838 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
LYSMD2-201ENST00000267838 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
LYSMD2-201ENST00000267838 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
LYSMD2-201ENST00000267838 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
LYSMD2-201ENST00000267838 PRM1P04553 51 aa5.21□□□□□ -1.57
LYSMD2-201ENST00000267838 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
LYSMD2-201ENST00000267838 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.59
LYSMD2-201ENST00000267838 GPR98Q8WXG9 6306 aa4.86□□□□□ -1.63
LYSMD2-201ENST00000267838 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
LYSMD2-201ENST00000267838 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
LYSMD2-201ENST00000267838 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
LYSMD2-201ENST00000267838 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.66
LYSMD2-201ENST00000267838 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
LYSMD2-201ENST00000267838 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
LYSMD2-201ENST00000267838 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
LYSMD2-201ENST00000267838 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
LYSMD2-201ENST00000267838 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
LYSMD2-201ENST00000267838 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.75
LYSMD2-201ENST00000267838 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
LYSMD2-201ENST00000267838 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
LYSMD2-201ENST00000267838 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
LYSMD2-201ENST00000267838 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
LYSMD2-201ENST00000267838 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
LYSMD2-201ENST00000267838 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
LYSMD2-201ENST00000267838 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
LYSMD2-201ENST00000267838 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
LYSMD2-201ENST00000267838 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 138.7 ms