RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
PRPF6-201ENST00000266079 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
PRPF6-201ENST00000266079 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
PRPF6-201ENST00000266079 MT1EP04732 61 aa4.47□□□□□ -1.69
PRPF6-201ENST00000266079 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
PRPF6-201ENST00000266079 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
PRPF6-201ENST00000266079 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
PRPF6-201ENST00000266079 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
PRPF6-201ENST00000266079 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
PRPF6-201ENST00000266079 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
PRPF6-201ENST00000266079 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
PRPF6-201ENST00000266079 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.7
PRPF6-201ENST00000266079 MT1LQ93083 61 aa4.37□□□□□ -1.71
PRPF6-201ENST00000266079 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
PRPF6-201ENST00000266079 SPRR2EP22531 72 aa4.35□□□□□ -1.71
PRPF6-201ENST00000266079 SPRR2BP35325 72 aa4.35□□□□□ -1.71
PRPF6-201ENST00000266079 SPRR2AP35326 72 aa4.35□□□□□ -1.71
PRPF6-201ENST00000266079 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
PRPF6-201ENST00000266079 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
PRPF6-201ENST00000266079 NEBP20929 6669 aa4.3□□□□□ -1.72
PRPF6-201ENST00000266079 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
PRPF6-201ENST00000266079 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
PRPF6-201ENST00000266079 MT1GP13640 62 aa4.24□□□□□ -1.73
PRPF6-201ENST00000266079 MT1MQ8N339 61 aa4.23□□□□□ -1.73
PRPF6-201ENST00000266079 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
PRPF6-201ENST00000266079 SPRR2DP22532 72 aa4.18□□□□□ -1.74
PRPF6-201ENST00000266079 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
PRPF6-201ENST00000266079 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
PRPF6-201ENST00000266079 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
PRPF6-201ENST00000266079 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.78
PRPF6-201ENST00000266079 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
PRPF6-201ENST00000266079 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
PRPF6-201ENST00000266079 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
PRPF6-201ENST00000266079 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
PRPF6-201ENST00000266079 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
PRPF6-201ENST00000266079 MT4P47944 62 aa3.72□□□□□ -1.81
PRPF6-201ENST00000266079 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
PRPF6-201ENST00000266079 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
PRPF6-201ENST00000266079 MT1AP04731 61 aa3.67□□□□□ -1.82
PRPF6-201ENST00000266079 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
PRPF6-201ENST00000266079 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
PRPF6-201ENST00000266079 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
PRPF6-201ENST00000266079 LCE4AQ5TA78 99 aa3.59□□□□□ -1.84
PRPF6-201ENST00000266079 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
PRPF6-201ENST00000266079 PRM1P04553 51 aa3.56□□□□□ -1.84
PRPF6-201ENST00000266079 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
PRPF6-201ENST00000266079 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
PRPF6-201ENST00000266079 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
PRPF6-201ENST00000266079 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
PRPF6-201ENST00000266079 MT3P25713 68 aa3.34□□□□□ -1.87
PRPF6-201ENST00000266079 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
PRPF6-201ENST00000266079 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
PRPF6-201ENST00000266079 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
PRPF6-201ENST00000266079 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
PRPF6-201ENST00000266079 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
PRPF6-201ENST00000266079 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
PRPF6-201ENST00000266079 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
PRPF6-201ENST00000266079 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
PRPF6-201ENST00000266079 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
PRPF6-201ENST00000266079 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
PRPF6-201ENST00000266079 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
PRPF6-201ENST00000266079 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
PRPF6-201ENST00000266079 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
PRPF6-201ENST00000266079 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
PRPF6-201ENST00000266079 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
PRPF6-201ENST00000266079 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
PRPF6-201ENST00000266079 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
PRPF6-201ENST00000266079 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
PRPF6-201ENST00000266079 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
PRPF6-201ENST00000266079 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
PRPF6-201ENST00000266079 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
PRPF6-201ENST00000266079 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
PRPF6-201ENST00000266079 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
PRPF6-201ENST00000266079 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PRPF6-201ENST00000266079 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
PRPF6-201ENST00000266079 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
PRPF6-201ENST00000266079 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms