RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SPRR2EP22531 72 aa6.93□□□□□ -1.3
SDF4-201ENST00000263741 SPRR2BP35325 72 aa6.93□□□□□ -1.3
SDF4-201ENST00000263741 SPRR2AP35326 72 aa6.93□□□□□ -1.3
SDF4-201ENST00000263741 LCE1AQ5T7P2 110 aa6.88□□□□□ -1.31
SDF4-201ENST00000263741 KRTAP19-7Q3SYF9 63 aa6.88□□□□□ -1.31
SDF4-201ENST00000263741 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
SDF4-201ENST00000263741 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
SDF4-201ENST00000263741 MT1EP04732 61 aa6.78□□□□□ -1.32
SDF4-201ENST00000263741 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
SDF4-201ENST00000263741 SPRR2DP22532 72 aa6.69□□□□□ -1.34
SDF4-201ENST00000263741 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
SDF4-201ENST00000263741 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
SDF4-201ENST00000263741 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
SDF4-201ENST00000263741 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
SDF4-201ENST00000263741 KRTAP2-3P0C7H8 128 aa6.55□□□□□ -1.36
SDF4-201ENST00000263741 MT1LQ93083 61 aa6.55□□□□□ -1.36
SDF4-201ENST00000263741 KRTAP2-4Q9BYR9 128 aa6.55□□□□□ -1.36
SDF4-201ENST00000263741 MT1GP13640 62 aa6.48□□□□□ -1.37
SDF4-201ENST00000263741 LCE3BQ5TA77 95 aa6.46□□□□□ -1.37
SDF4-201ENST00000263741 MT1MQ8N339 61 aa6.44□□□□□ -1.38
SDF4-201ENST00000263741 INE1O15225 51 aa6.43□□□□□ -1.38
SDF4-201ENST00000263741 DSTQ03001 7570 aaKnown RBP6.38□□□□□ -1.39
SDF4-201ENST00000263741 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
SDF4-201ENST00000263741 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
SDF4-201ENST00000263741 KRTAP4-3Q9BYR4 195 aa6.35□□□□□ -1.39
SDF4-201ENST00000263741 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
SDF4-201ENST00000263741 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
SDF4-201ENST00000263741 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
SDF4-201ENST00000263741 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
SDF4-201ENST00000263741 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
SDF4-201ENST00000263741 MT4P47944 62 aa5.86□□□□□ -1.47
SDF4-201ENST00000263741 LCE4AQ5TA78 99 aa5.86□□□□□ -1.47
SDF4-201ENST00000263741 KRTAP5-4Q6L8H1 288 aa5.86□□□□□ -1.47
SDF4-201ENST00000263741 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
SDF4-201ENST00000263741 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
SDF4-201ENST00000263741 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
SDF4-201ENST00000263741 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
SDF4-201ENST00000263741 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.49
SDF4-201ENST00000263741 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
SDF4-201ENST00000263741 MT1AP04731 61 aa5.55□□□□□ -1.52
SDF4-201ENST00000263741 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
SDF4-201ENST00000263741 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
SDF4-201ENST00000263741 KRTAP20-2Q3LI61 65 aa5.54□□□□□ -1.52
SDF4-201ENST00000263741 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
SDF4-201ENST00000263741 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
SDF4-201ENST00000263741 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
SDF4-201ENST00000263741 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
SDF4-201ENST00000263741 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
SDF4-201ENST00000263741 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
SDF4-201ENST00000263741 KRTAP5-10Q6L8G5 202 aa5.19□□□□□ -1.58
SDF4-201ENST00000263741 MT3P25713 68 aa5.03□□□□□ -1.6
SDF4-201ENST00000263741 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
SDF4-201ENST00000263741 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
SDF4-201ENST00000263741 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.63
SDF4-201ENST00000263741 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
SDF4-201ENST00000263741 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
SDF4-201ENST00000263741 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
SDF4-201ENST00000263741 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
SDF4-201ENST00000263741 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
SDF4-201ENST00000263741 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
SDF4-201ENST00000263741 MUC5ACP98088 5654 aa4.46□□□□□ -1.69
SDF4-201ENST00000263741 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
SDF4-201ENST00000263741 PRM1P04553 51 aa4.36□□□□□ -1.71
SDF4-201ENST00000263741 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
SDF4-201ENST00000263741 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
SDF4-201ENST00000263741 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
SDF4-201ENST00000263741 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
SDF4-201ENST00000263741 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
SDF4-201ENST00000263741 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
SDF4-201ENST00000263741 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
SDF4-201ENST00000263741 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
SDF4-201ENST00000263741 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
SDF4-201ENST00000263741 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
SDF4-201ENST00000263741 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
SDF4-201ENST00000263741 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
SDF4-201ENST00000263741 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
SDF4-201ENST00000263741 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 23 ms